Gene PMT9312_0116 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPMT9312_0116 
Symbol 
ID3764900 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameProchlorococcus marinus str. MIT 9312 
KingdomBacteria 
Replicon accessionNC_007577 
Strand
Start bp115259 
End bp116056 
Gene Length798 bp 
Protein Length265 aa 
Translation table11 
GC content33% 
IMG OID637796622 
Productputative uroporphyrinogen III synthase 
Protein accessionYP_396614 
Protein GI78778502 
COG category[H] Coenzyme transport and metabolism 
COG ID[COG1587] Uroporphyrinogen-III synthase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones21 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGCCAATAG TTGATCGACC CCTTGATCAA AGAAATATAA TTATCACTCG ATCAAAAGAG 
GGGATATTGG ATATCAAAAA GATATTCACA AGCAAAGGCG CTAATATATA TGAGTTTCCT
GCAATAAGTA TTGGAGATCC TGATGATTTA GATCCTCTTG ACGAAGCGTT AAATCAAATA
AATGATTTTC ATTGGATTAT TTTTTCTAGT AGTAATGGGA TCAAATTTGT TGATAAAAGA
CTTAGATATT TTCAAAGTTC ATTAAAGGAG TGTTCTAAAA AAACAAAAAT CGCTGTAGTC
GGAGAAAAAA CTGCACAAAC TCTTGATGAT TTTGGGATTA AGGCTGATTT CATACCCCCA
GAATATGTTG CCGAAAGTTT AATTGATAAT TTTCCAATAT CTGGATATGG ACTTCGAGTA
TTTTTGCCAA GAGTCCAAAC AGGAGGAAGG GATCTAATTG CAGATCAATT TAGAAAGGCT
GGTTCGCGTG TATTTGAGGT TGCTGCGTAT GAAACTAGAT GTCCGGATTC AATCCCAGAA
GAGACAATTG ATATTATTGT TAATCGAAAA GTCGATGCAT TTATTTTCTC AAGTGGCAAA
ACTGTATCAA ATTCTGCTGT TTTACTAGAA AAAGCCTTTG GTAAAGAATG GTTAAAATAT
TTAGATCAAA CTAGGTTCTT AACTATTGGA CCTCAAACAA CAAAAATATG TAAAAAGATT
TTTGGCAGAG TTGATAGTCA GGCACAAAAA TATACTTTTG ATGGACTACT GGATGTAGCA
ATTAGTATTT TTAGTTAG
 
Protein sequence
MPIVDRPLDQ RNIIITRSKE GILDIKKIFT SKGANIYEFP AISIGDPDDL DPLDEALNQI 
NDFHWIIFSS SNGIKFVDKR LRYFQSSLKE CSKKTKIAVV GEKTAQTLDD FGIKADFIPP
EYVAESLIDN FPISGYGLRV FLPRVQTGGR DLIADQFRKA GSRVFEVAAY ETRCPDSIPE
ETIDIIVNRK VDAFIFSSGK TVSNSAVLLE KAFGKEWLKY LDQTRFLTIG PQTTKICKKI
FGRVDSQAQK YTFDGLLDVA ISIFS