Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | PMT9312_0116 |
Symbol | |
ID | 3764900 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Prochlorococcus marinus str. MIT 9312 |
Kingdom | Bacteria |
Replicon accession | NC_007577 |
Strand | + |
Start bp | 115259 |
End bp | 116056 |
Gene Length | 798 bp |
Protein Length | 265 aa |
Translation table | 11 |
GC content | 33% |
IMG OID | 637796622 |
Product | putative uroporphyrinogen III synthase |
Protein accession | YP_396614 |
Protein GI | 78778502 |
COG category | [H] Coenzyme transport and metabolism |
COG ID | [COG1587] Uroporphyrinogen-III synthase |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 21 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGCCAATAG TTGATCGACC CCTTGATCAA AGAAATATAA TTATCACTCG ATCAAAAGAG GGGATATTGG ATATCAAAAA GATATTCACA AGCAAAGGCG CTAATATATA TGAGTTTCCT GCAATAAGTA TTGGAGATCC TGATGATTTA GATCCTCTTG ACGAAGCGTT AAATCAAATA AATGATTTTC ATTGGATTAT TTTTTCTAGT AGTAATGGGA TCAAATTTGT TGATAAAAGA CTTAGATATT TTCAAAGTTC ATTAAAGGAG TGTTCTAAAA AAACAAAAAT CGCTGTAGTC GGAGAAAAAA CTGCACAAAC TCTTGATGAT TTTGGGATTA AGGCTGATTT CATACCCCCA GAATATGTTG CCGAAAGTTT AATTGATAAT TTTCCAATAT CTGGATATGG ACTTCGAGTA TTTTTGCCAA GAGTCCAAAC AGGAGGAAGG GATCTAATTG CAGATCAATT TAGAAAGGCT GGTTCGCGTG TATTTGAGGT TGCTGCGTAT GAAACTAGAT GTCCGGATTC AATCCCAGAA GAGACAATTG ATATTATTGT TAATCGAAAA GTCGATGCAT TTATTTTCTC AAGTGGCAAA ACTGTATCAA ATTCTGCTGT TTTACTAGAA AAAGCCTTTG GTAAAGAATG GTTAAAATAT TTAGATCAAA CTAGGTTCTT AACTATTGGA CCTCAAACAA CAAAAATATG TAAAAAGATT TTTGGCAGAG TTGATAGTCA GGCACAAAAA TATACTTTTG ATGGACTACT GGATGTAGCA ATTAGTATTT TTAGTTAG
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Protein sequence | MPIVDRPLDQ RNIIITRSKE GILDIKKIFT SKGANIYEFP AISIGDPDDL DPLDEALNQI NDFHWIIFSS SNGIKFVDKR LRYFQSSLKE CSKKTKIAVV GEKTAQTLDD FGIKADFIPP EYVAESLIDN FPISGYGLRV FLPRVQTGGR DLIADQFRKA GSRVFEVAAY ETRCPDSIPE ETIDIIVNRK VDAFIFSSGK TVSNSAVLLE KAFGKEWLKY LDQTRFLTIG PQTTKICKKI FGRVDSQAQK YTFDGLLDVA ISIFS
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