Gene PMT9312_0115 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPMT9312_0115 
Symbol 
ID3764899 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameProchlorococcus marinus str. MIT 9312 
KingdomBacteria 
Replicon accessionNC_007577 
Strand+ 
Start bp114880 
End bp115272 
Gene Length393 bp 
Protein Length130 aa 
Translation table11 
GC content28% 
IMG OID637796621 
Productribosome-binding factor A 
Protein accessionYP_396613 
Protein GI78778501 
COG category[J] Translation, ribosomal structure and biogenesis 
COG ID[COG0858] Ribosome-binding factor A 
TIGRFAM ID[TIGR00082] ribosome-binding factor A 


Plasmid Coverage information

Num covering plasmid clones24 
Plasmid unclonability p-value1 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGCCAAATA ATTTCCGTCT TGCAAAAGTT TCTTCTCTTT TAAAGAAAGA AATCACCCTT 
ATTTTGCAAA ATGATTTGGA AAATGATCTT ATTAGAGATT ATTTCGTCAA TATTTCTAAG 
ATTGATTTAT CAGGTGATTT ACAACACTGT AAAATTTACA TAACTTCAAC TGCTAAAGAG 
ACAGTAAGGA AAGAGATTGT GGCAAATTTG AATACCGCTA AAAGCTTTAT AAGAAATAAT 
TTAGGAAAAA GAATAGAGAT GAGAAGAGTT CCAGAGATAA TTTTTAAAGA AGATATTGTT 
CTTGACAAAG GATTATCAGT CTTGAAACTT CTTGATGAAT TAAAAAATAA ACATCAAGAC 
AAGAATTATG AGGATAAGGA TGCCAATAGT TGA
 
Protein sequence
MPNNFRLAKV SSLLKKEITL ILQNDLENDL IRDYFVNISK IDLSGDLQHC KIYITSTAKE 
TVRKEIVANL NTAKSFIRNN LGKRIEMRRV PEIIFKEDIV LDKGLSVLKL LDELKNKHQD 
KNYEDKDANS