Gene PMT9312_0106 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPMT9312_0106 
Symbol 
ID3764889 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameProchlorococcus marinus str. MIT 9312 
KingdomBacteria 
Replicon accessionNC_007577 
Strand
Start bp107562 
End bp108977 
Gene Length1416 bp 
Protein Length471 aa 
Translation table11 
GC content29% 
IMG OID637796610 
Producthypothetical protein 
Protein accessionYP_396603 
Protein GI78778491 
COG category[J] Translation, ribosomal structure and biogenesis 
COG ID[COG0621] 2-methylthioadenine synthetase 
TIGRFAM ID[TIGR00089] RNA modification enzyme, MiaB family
[TIGR01125] MiaB-like tRNA modifying enzyme YliG, TIGR01125 


Plasmid Coverage information

Num covering plasmid clones17 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAACATCA TTTTCTATTT TGCATTTATT GGTTTTGGTT TTGGAGCTGC TTTCGCATTA 
GATAAGCTCT TAAGAGCAGT TAAATTAATT TAA
 
Protein sequence
MRVINGMPFE FFNFLKFVKQ NNLNVKEKKF SKVAFSHVGC EKNLVDTQHM QGLLDKDGYE 
VESNINDANI VVVNTCSFIE TAREESIRKI LEYTNQGKEV IVAGCMAQHF KEELLKEIPE
IKGLVGTGDY QKIAKVLDRV EKGEIVNEVS KIPEFIADEE IPRFVDKNKF VAYLRIAEGC
NYNCAFCIIP KLRGPQRSRT IESIVSEAKS LAKQGIKEII LISQITTNYG KDIYGKPSLA
KLLNELSKVP IPWIRIHYAY PTGLTDEVIR AFKDSKNIVP YFDLPLQHSH PDVLKSMNRP
WQASLNESIL EKIREEIPSA VLRTSLIVGF PGEKKEHFEH LLEFLDRHKF DHVGVFIFSP
EEGTAAFDLP NKVSPEVAAA RKDNVISVQQ NISKDKNQSY VGSKMKILVE KISDNNELIG
RSYNFAPEID GNVILSISAN NYLRNYIGKF VEANISFADE YDLYGETIKI L