Gene PMT9312_0105 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPMT9312_0105 
Symbol 
ID3764888 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameProchlorococcus marinus str. MIT 9312 
KingdomBacteria 
Replicon accessionNC_007577 
Strand
Start bp106576 
End bp107511 
Gene Length936 bp 
Protein Length311 aa 
Translation table11 
GC content33% 
IMG OID637796609 
Productthioredoxin domain-containing protein 
Protein accessionYP_396602 
Protein GI78778490 
COG category[S] Function unknown 
COG ID[COG4243] Predicted membrane protein 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones22 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGGCGCTTA AGACTTTAAA AAGTAGAAAT AAAAAGGATC TAAAATGGCC AAAAATTTTA 
ATCTCTATTC TTAGCACTAT AGGCATAGTT GACACAGGTT CAATTACTTT AAAAAACTGG
GGATTATTTA CTTCTCTTTC ATGCCCAGGG ACACAAAATG GTTGTGAAAC AGTTTTAAAT
AGTCCTTGGG GTACTTTATT TGCGAATAAT CAAATTAATA TACCTCTTTC ATTAGCAGGA
TTGATAACTT ATTTATCAAT ATTAGTTATC ACAATAATAC TTTCACTTAA TTTAATTTCC
CCAAAAGAAA AGCTAAACAA GTTTTTATGG TGGTTAATAT TTCTAATCTC TTGTGCCTCA
TCTACATTTA GCTTTTTGTT AATTAATATA ATGTTTTTTA AGATTCAAGC ATATTGCTTT
TTTTGTATAC TTTCAGCAAT TTTATCGTTT TCTATCTTTA TAATTTCTAT GATTGGAGCA
AAGTTTGAAA GTAGAGAACC TATGATCTTT AGAGGTTTTG TAGTATTCCT AAGTGTCCTC
GTAGGTGGCT TAATATGGTC AACTAACGTT GACCCTTCAA ATGCTATTGA TGTTTCAAGT
CCCACTGACA ATTTATCACC GCTAATTACT ACTTCAAGCT CTCCCCAGAA GGTGCTATTT
GCAAAATTCT TGAGAGAAAA CAATATTGTT ATGTATAGTG CCTATTGGTG CCCGCATTGC
CATGATCAGA AACAACTATT TGGTAAGGAG GCAGTTAAAG AATTAAAAGT AGTGGAATGT
GCTAGTGATG GGAAAGACAA TCAATATGAG CTATGCCAAA CCAAAGGAAT TAGTGGATTT
CCTTCTTGGG AAATAAATGG AGAAATTATT AGCGGTACTC TCGACCTGAA TGATTTAGCG
ATAACGACTG GCTATCAAGG AGATTCTAAT TTTTAA
 
Protein sequence
MALKTLKSRN KKDLKWPKIL ISILSTIGIV DTGSITLKNW GLFTSLSCPG TQNGCETVLN 
SPWGTLFANN QINIPLSLAG LITYLSILVI TIILSLNLIS PKEKLNKFLW WLIFLISCAS
STFSFLLINI MFFKIQAYCF FCILSAILSF SIFIISMIGA KFESREPMIF RGFVVFLSVL
VGGLIWSTNV DPSNAIDVSS PTDNLSPLIT TSSSPQKVLF AKFLRENNIV MYSAYWCPHC
HDQKQLFGKE AVKELKVVEC ASDGKDNQYE LCQTKGISGF PSWEINGEII SGTLDLNDLA
ITTGYQGDSN F