| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PMT9312_0045 |
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| Symbol | alaS |
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| ID | 3764826 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Prochlorococcus marinus str. MIT 9312 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007577 |
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| Strand | + |
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| Start bp | 46058 |
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| End bp | 48718 |
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| Gene Length | 2661 bp |
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| Protein Length | 886 aa |
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| Translation table | 11 |
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| GC content | 31% |
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| IMG OID | 637796548 |
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| Product | alanyl-tRNA synthetase |
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| Protein accession | YP_396542 |
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| Protein GI | 78778430 |
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| COG category | [J] Translation, ribosomal structure and biogenesis |
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| COG ID | [COG0013] Alanyl-tRNA synthetase |
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| TIGRFAM ID | [TIGR00344] alanine--tRNA ligase |
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Plasmid Coverage information |
| Num covering plasmid clones | 5 |
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| Plasmid unclonability p-value | 0.214669 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGACATCTC AACTAATTAA AAAAATAGTT ACTGGAGATG AGATAAGAAA TGCTTTTTTA
AAATTTTACA GTGAAAAATT ACATAAAATC ATTCCAAGTG CATCTTTGAT TCCAGATGAC
CCTACGGTTA TGCTAACAAT TGCTGGAATG CTACCTTTTA AACCAGTTTT TTTAGGTTTA
AAAGAAAGAC CATCAAAAAG GGCTACATCT AGCCAAAAGT GCATCAGAAC AAATGATATA
GAAAACGTTG GAGTTACAGC TAGACACCAC ACTTTTTTTG AAATGCTTGG TAATTTCTCT
TTTGGAGATT ATTTTAAACG AGAGGCTATT CAATGGGCTT GGGAATTAGT TACTAATATT
TATCAACTTT CTGTTGAAAA TATAATTGTG AGTGTTTTTC ACGAAGACGA AGAGTCTGCA
AAAATTTGGA GAGATGAAAT TGGTATTCAT CCAGATAGGA TAGTGAAACT AGGTGAGGAA
GATAATTTTT GGTCATCTGG CAAAACAGGT CCATGTGGAC CTTGTTCAGA ACTTTATTAT
GATTTTCATC CTGAAAAGGG TCTGCAGAAT ATTGATTTAG AAGATGGAGA TCGTTTTATT
GAATTTTATA ATCTTGTTTT TATGCAATAT AATCGTGATT CTAATGGAAA ATTGACAGAT
TTAAAATTTA AAAATATTGA TACAGGAATG GGTCTTGAAA GGATGGCTCA AATACTACAA
GAAAAGCAAA ATAATTATGA GACAGATTTA ATTTTTCCTA TTATTCAAAA AATTTGTGAG
ATTGCAAATA TTGATTATTT TTCTTCAGAT GATAAAAACA AAATTTCTTT AAAAATCATT
GGTGATCATA CAAGAGCTGT GATTCATTTA ATTTCTGATG GAGTAGCAGC AAGTAATCTC
GGAAGGGGAT ATATATTAAG AAGGCTTATT AGAAGAATGG TCAGACATGG GAGATTATTA
GGTATAACAA ATGAATTTTT ACCCCATATT GCTACTGTCG GGATCAATTT AATGCAAAAT
AATTATCCTG ATTTAAAAAA TAATAATGAT TTAATTTTGA ATGAGATAAA AATTGAAGAA
ATAAGATTTA GGGAAACTCT TGAAAGAGGA GAGAAATTGC TAGATGAGTT AATTTCTTCA
GGGCAGAAAT TAATTTCTGG TTTTAAAGCT TTTGAACTTT ATGATACTTA TGGATTTCCT
CTAGAACTTA CTGTAGAAAT TGCTGAAGAA AATAGTATCA GTGTAGATGT AAAGGGTTTT
GAAGAAGAAA TGAATGCACA AAAAGAGAGA GCTAAAGCTG CTTCAAGTAA TATTGATTTA
ACTTTAGAGG GATCATTAGA GCGAGAAATA GATCTTTTTA ACAAAACTGT TTTTAATGGT
TATGATTTAC TCCTTTCGGA AGCTGAAATA AAGGGTATAT TCTTGGATTC AACATTAGTA
AAGCAAGCAA GTGAAGGACA GAAAGTTTTA ATTGTTCTTG ATCAGACAAC TTTTTATGGA
GAATCTGGCG GGCAAGTTGG TGATATTGGA ACGATATTTT CAAAAGATTT AGAGGTCTTA
GTTGATAATG TTATGCGAAA GAAAAATGTT TTTTTACATT ATGGAACGAT CAAAAAAGGA
ATATTAACTA TTGGACAAAA AGTCAAGACT AATGTTAGCT CCTCTAATAG AGCTAAGGCT
GCTGCAAATC ATACAGCTAC TCATTTATTA CAATCTGCAC TTAAATCAGT TGTTAACGAA
AGTGTTGGAC AAAAAGGTTC ATTAGTAGCC TTTAATAAAT TACGATTTGA CTTTAATTCC
TCTAATCCTA TTTCTAAAGA TCAAATTTCT AAGATTGAGA CTTTAGTTAA CTCTTGGATT
ATGGAAAATC ATGCCTTAGA AATAAAAAAT ATGTCTAAGA GTGAGGCTCT TGAAAAGGGC
GCAGTCGCCA TGTTTGGAGA AAAATATGAT GATGAAGTGC GCGTTGTTAA TGTACCAGGA
GTTTCAATGG AACTTTGTGG TGGCACACAT GTTAAAACTA CATCCGAATT AGGTTCTTTC
AAAATAATTA GCGAGGAAGG AATCTCAGCC GGCGTAAGAA GGATCGAGGC ATTATCAGGC
CAATCAGCAT TAGACTATTT CAGTGATAGA AATGCTTTAG TAAATCAACT AAGTGATTTG
TTAAAAGCAA ATCCTAATCA ACTTTTTGAA AGGGTTAATA ATTTACAAGC AGAGCTTATT
AATAAGAATA AAGAGATACA AAAAATGAAA GATGAAATTG CATATTTTAA ATACTCTTCT
ATAAAATCCT CCGCAGAAAT AGTAAATTCT TTTTCAATTT TAGTAAATCA GATTGATGGC
TTAGATGGGA ATTCTTTGCA ATCTGCAGCA CTTAATTTAA CTTCTCATTT GGGAAATAAA
GCAATAGTGA TTCTTGGGGG AATACCAAAT CCAGAAAATA GAAAGTTGTT ATTTGTAGTT
TCTTTAGGTG ATGATCCAGT AAAAATAGGA TTGCATGCAG GTAAAATAAT TAATGAGATT
GCAAGAATTT GTTCGGGAGG AGGAGGAGGA AAGCCTAACT TTGCTCAAGC AGGTGCTAAA
GATATTGATA AGTTAAGTGA TGCTCTAGAT TATGCTAAAA ATTATTTGCA AAAAACATTA
GATAGTCATT CTGATAAATA A
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| Protein sequence | MTSQLIKKIV TGDEIRNAFL KFYSEKLHKI IPSASLIPDD PTVMLTIAGM LPFKPVFLGL
KERPSKRATS SQKCIRTNDI ENVGVTARHH TFFEMLGNFS FGDYFKREAI QWAWELVTNI
YQLSVENIIV SVFHEDEESA KIWRDEIGIH PDRIVKLGEE DNFWSSGKTG PCGPCSELYY
DFHPEKGLQN IDLEDGDRFI EFYNLVFMQY NRDSNGKLTD LKFKNIDTGM GLERMAQILQ
EKQNNYETDL IFPIIQKICE IANIDYFSSD DKNKISLKII GDHTRAVIHL ISDGVAASNL
GRGYILRRLI RRMVRHGRLL GITNEFLPHI ATVGINLMQN NYPDLKNNND LILNEIKIEE
IRFRETLERG EKLLDELISS GQKLISGFKA FELYDTYGFP LELTVEIAEE NSISVDVKGF
EEEMNAQKER AKAASSNIDL TLEGSLEREI DLFNKTVFNG YDLLLSEAEI KGIFLDSTLV
KQASEGQKVL IVLDQTTFYG ESGGQVGDIG TIFSKDLEVL VDNVMRKKNV FLHYGTIKKG
ILTIGQKVKT NVSSSNRAKA AANHTATHLL QSALKSVVNE SVGQKGSLVA FNKLRFDFNS
SNPISKDQIS KIETLVNSWI MENHALEIKN MSKSEALEKG AVAMFGEKYD DEVRVVNVPG
VSMELCGGTH VKTTSELGSF KIISEEGISA GVRRIEALSG QSALDYFSDR NALVNQLSDL
LKANPNQLFE RVNNLQAELI NKNKEIQKMK DEIAYFKYSS IKSSAEIVNS FSILVNQIDG
LDGNSLQSAA LNLTSHLGNK AIVILGGIPN PENRKLLFVV SLGDDPVKIG LHAGKIINEI
ARICSGGGGG KPNFAQAGAK DIDKLSDALD YAKNYLQKTL DSHSDK
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