Gene PMT9312_0043 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPMT9312_0043 
Symbol 
ID3764824 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameProchlorococcus marinus str. MIT 9312 
KingdomBacteria 
Replicon accessionNC_007577 
Strand
Start bp42366 
End bp44147 
Gene Length1782 bp 
Protein Length593 aa 
Translation table11 
GC content32% 
IMG OID637796546 
Productflavoprotein 
Protein accessionYP_396540 
Protein GI78778428 
COG category[C] Energy production and conversion
[R] General function prediction only 
COG ID[COG0426] Uncharacterized flavoproteins
[COG1853] Conserved protein/domain typically associated with flavoprotein oxygenases, DIM6/NTAB family 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones15 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGTCAGAAG TTAATAAAAA CTTATCAAAA TTTGAAATTA CCAAAAATTT TACTTGTATC 
AGATTCTTAG ACCAAAATAA AGAAAGATTT GAACTTGAAT TTAACCTTGA GAAAGGAACC
TCTTTTAATA CTTTTTTAAT TAGAAGTCAT GAGGAACTTT TTATTATTCA TCCACCTGAA
AAACAATATT TAAACTCATT TAAAAAAGTA ATCTCTAGTG TTTGCGATCA ATTTAAATTA
GATAAAATCA ATGTCATTTC TGGTCATATT AATCCCCAAA TTATTGAAAC TATAAAAAAT
CTAAGTACCC AATTTAAAAA CACAACTATT ACTTGCTCTA ATCCAGGTTA TAAACTTATT
AGCGAACTTT GGAATCAAAG AAATCCTAAC TTAGAAAACT TTGTTGAAAC TAAATTACCT
GAAATAAACA TAATCAAAAA AGAACTTAAT TTAGAATTAG ATAACATTTA TCTAGAGTTA
ATTCCTATTC CAACAGCACG TTGGCCTGGA GGCTTGATAA TTTATGAACG TAATCAAGAA
ATACTTCTAA GTGAAAAAAT TTTCTCTGCC CATATAGCAT CTGAAGATTG GTCTGAGACA
AATCGAGTTA GTACAGAAGT TGATAGGAAA CATTTTTATG ATTGCTTAAT GGCACCAATG
TCTAATCAAG TAGTATCAAT TGCTGAAAAA ATTGCAGATT ACGACATTAA AACTATTGCC
CCTCTGCACG GTCCCGCGAT CGAATATAGC CTAAAAAGCT TTTTAAATGA CTACATTAGA
TGGGGTGAGA ATCTTTCAAC AAATAATCCT AAGATCGCTC TGATATATGC AAGTGCGTAT
GGAAATACGG CCTCAATAGG TGATGCATTA GCTAAAGGGA TAAATAGAAC TTCTGTTGAA
GTTGAAAGTA TTAATTGTGA ATTTACGTCA AATGATGTAC TTATAAAATC TATCCAAAAT
GCTGATGGCT ATTTAATAGG ATCTCCCACA CTTGGTGGTC ACGCCCCAAC TCCTATAATA
AGTGCACTTG GAACATTATT ATCAGAAGGT AATAGAGATA AACCAGTAGG AATTTTTGGT
AGTTTTGGCT GGAGCGGCGA AGCAATAGAT TTACTGGAAT CAAAACTAAA AGATGGTGGT
TTTAGGTTTA GTTTTGACCC TATAAGAATT AAATTCAGTC CAAATAAACC AAAGATTAAA
GAGCTAGAAG AAATAGGAAC TCACTTTGGG AGAAAAATTA TAAAAAAAGC AAAGAAAAAG
CCCAGAAAAT CTGATACCGG AATGATTACA AGTAAAACGG ATCCAAAATT ACAAGCTCTT
GGAAGGGTGA TTGGCTCACT ATGTGTTCTA ACTGCTTCTA AAGGTAAAGA TAAGAACAAT
ATCAAAGGAG CAATGCTTGC ATCTTGGGTT AGTCAAGCAA GTTTTTCCCC GCCTGGATTA
AGTATTGCAG TAGCAAAAGA TAGATCGGTA GAGTCACTCC TTCAAATTGG AGACTCTTTT
GCTTTAAACA TTTTAAGTGA AAAAGATTTT AAAGAACCTT TAAAAAGATT CACTAAACCC
TTTGCACCAG GAGAAGATAG ATTTCAAGGA TTAGATATTG AATTGACACC TAATGAACAA
ATAATTATTC CTCAATCTTT AGCATGGTTA GATGCCTCTG TAAAAGAAAG AATGGAATGT
GGAGATCATT GGGTGATTTA CGCAGAAGTC CTACACGGTA ATATATTAAA ATCCGATAGT
TTAACAGCAG TTCATCACCG TAAAACTGGA TCTAACTATT AA
 
Protein sequence
MSEVNKNLSK FEITKNFTCI RFLDQNKERF ELEFNLEKGT SFNTFLIRSH EELFIIHPPE 
KQYLNSFKKV ISSVCDQFKL DKINVISGHI NPQIIETIKN LSTQFKNTTI TCSNPGYKLI
SELWNQRNPN LENFVETKLP EINIIKKELN LELDNIYLEL IPIPTARWPG GLIIYERNQE
ILLSEKIFSA HIASEDWSET NRVSTEVDRK HFYDCLMAPM SNQVVSIAEK IADYDIKTIA
PLHGPAIEYS LKSFLNDYIR WGENLSTNNP KIALIYASAY GNTASIGDAL AKGINRTSVE
VESINCEFTS NDVLIKSIQN ADGYLIGSPT LGGHAPTPII SALGTLLSEG NRDKPVGIFG
SFGWSGEAID LLESKLKDGG FRFSFDPIRI KFSPNKPKIK ELEEIGTHFG RKIIKKAKKK
PRKSDTGMIT SKTDPKLQAL GRVIGSLCVL TASKGKDKNN IKGAMLASWV SQASFSPPGL
SIAVAKDRSV ESLLQIGDSF ALNILSEKDF KEPLKRFTKP FAPGEDRFQG LDIELTPNEQ
IIIPQSLAWL DASVKERMEC GDHWVIYAEV LHGNILKSDS LTAVHHRKTG SNY