Gene PMT9312_0040 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPMT9312_0040 
Symbol 
ID3764821 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameProchlorococcus marinus str. MIT 9312 
KingdomBacteria 
Replicon accessionNC_007577 
Strand+ 
Start bp39139 
End bp39747 
Gene Length609 bp 
Protein Length202 aa 
Translation table11 
GC content29% 
IMG OID637796543 
Producthypothetical protein 
Protein accessionYP_396537 
Protein GI78778425 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones8 
Plasmid unclonability p-value0.00582045 
Plasmid hitchhikingNo 
Plasmid clonabilitydecreased coverage 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
TTGATAAATT TGAAAAACTC TGATAAAAAG ATAACTAATC ATCTTCAACA AGATGTAGTC 
AAAATATCCG GTAAAACAAT TTTTATTAAT CCTTTTTTGT ATTGGAGAAG ATTCGATGAA 
AATACTAATA GATGGCTTAG AGAACCTGGT CAAATGTCAG AGGATCAAAT TCATCCAAAT 
AGGAATCGTT TTTATCCAGA AATAGAGTGG GCTGATTTAA GTCATGAGCA AAAATTAATC 
AAAGATGCAA CTGTTGAGAT GTTTTTAAAA ACTCTTGAAT TGATAAGTAC ATTTCATCCT 
TATCTTAATT CAGGTCAGTT ATTAGAACTA GAGAGAAAAA TGGCGATTAT AAAAAAAATA 
CCTTTTGAAA ACTGGGTTAA AAAATCTTTC GCTAAAAAAG CAAGATTATT AGAAAATGAA 
AAAAGAAAAT TTCAAAGAGA AAGGTTTTTT AGTAGCTGGA TGGAGTGGTT TAGTCTTGAA 
AATACTCAAC AAGCTCTTTT ACCAGTAATC GTCACGATAT TTATCTCATC ATTTATAGGG 
TGGTCTTTAG GAATATCTAA AAATAGTTGT AATCCTTATT TTGAACAAAA CTCAGAACAG 
TTAAATTAA
 
Protein sequence
MINLKNSDKK ITNHLQQDVV KISGKTIFIN PFLYWRRFDE NTNRWLREPG QMSEDQIHPN 
RNRFYPEIEW ADLSHEQKLI KDATVEMFLK TLELISTFHP YLNSGQLLEL ERKMAIIKKI 
PFENWVKKSF AKKARLLENE KRKFQRERFF SSWMEWFSLE NTQQALLPVI VTIFISSFIG 
WSLGISKNSC NPYFEQNSEQ LN