| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PMT9312_0038 |
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| Symbol | |
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| ID | 3764819 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Prochlorococcus marinus str. MIT 9312 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007577 |
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| Strand | - |
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| Start bp | 36581 |
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| End bp | 38065 |
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| Gene Length | 1485 bp |
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| Protein Length | 494 aa |
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| Translation table | 11 |
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| GC content | 28% |
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| IMG OID | 637796541 |
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| Product | TPR repeat-containing protein |
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| Protein accession | YP_396535 |
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| Protein GI | 78778423 |
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| COG category | [U] Intracellular trafficking, secretion, and vesicular transport |
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| COG ID | [COG5010] Flp pilus assembly protein TadD, contains TPR repeats |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 14 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGAAAGGTT TTGGCGAAAA GAACCAATTA AAGAAAATAA AAACACCAAA AAATGCAGAG
ATACTAGATA GCGATCAATT GATTAAAAAA GCATTCACAC TGCAAGCACA AGGAAGGACA
CTAGAAGCAG CAAAACACTA TGCATATCTT ATTAAACATG GAATAAAAGA CTATAGAGTT
TTTTCAAATT ATGGAATATT CCTAAACGAA ATCGGAAAAC ACAAAGAAGC AGAATTAGAA
CTTAAAAAAG CAATTTCTTT AAATCCTAAA TATGCAAATG CTTACTACAA TCTGGCAGTT
TTATTTATTG GTCAAGGAAA TTTGGGGAAA GCAGAATTAG AACTTAAAAA AGCAATAAAA
CTTAAATCAG ACTTTGCTAT TGCTTACTAT AATCTTGGAT TTATTTTAAA AGATCTGGGT
AGATTAAAAG AGGCAGATTC ATATAATCAA AAAGCAGTTG AAATAGATCC TCACTTGACT
GATGCATATT TATCATTATC AACTATGTAT TCTGGTGATA AAACTCCAAA ATGGCACAAT
CAACTTTTTT CTGAAAGTCT TATAAAAAAC AAAAATAATA GAGAATTAAT AAATATTTTT
TTCGCAAGAT CAAATATTTT TCATAGAGAA GGAAAATATC AAGAAAGCGC TGAGAATCTT
ATTAATGCAA ATAATATCAA ACTTAGATTG AATAAATCTG AAGCAAATTT ATTAATCAAT
AAAACTAAAA AGTTGAAAAT ATCCTCAGAT AATTATGAAA GAAAAAATAA AGCATTTGGA
AATTATCCAA TGTCTATTTT TATAGTAGGA CTTCCTAGAT GTGGTTCTAC CCTGGTTGAA
TCAATCATAA GTTTGAATTC TCATGTAAGA GATCTTGGAG AAGTCAATAT CTTTGAAAAA
TCATATAGAG AATATAAAGA ATCTGAAAAA AAAACAGACC TTAGTGAAAT ATATTGGAAA
AAATTAGAAA TAACCAAAAA TAAAAGATCC ACAACAAATA AATGGTTATT TAATTATCAA
TATGCAGGCA TAATTGCACA AGCAATTCCT AATGCAAAAA TAATACATTG CTATAGAAAT
CCTTTAGATA ATATCCTTTC TATGTATAGA GCACATTTCG CAACAGGGAA TAATTTCTCT
TCAAGTTTGG TTGATTCTGT TGCAGTTTAT TCTGATCAAG AGGAGATCAT GAAAATATAC
AAAAAAGAAT TTAAAAATCA TATATATGAA TTAAATTACG ATAAATTAGT GACTCATCCT
TCAGAAGAGA TAAAATCATT AATTCTTTGG TTAGGTTGGA AATGGAATGA TTTATATTTA
TCGCCACATT TAAATAATCG TAAAGTCTCA ACAAGAAGCA ATGTTGAGGT TCGTTCACCA
ATCACTACAA AATCTTTAGG AGGATGGAAA AACTATAAAG AGATGCTTAG ACCTGCAATG
GAAATCATTA CTCAAAAGGA TCAATATAAA GACCTAAAGT ATTAA
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| Protein sequence | MKGFGEKNQL KKIKTPKNAE ILDSDQLIKK AFTLQAQGRT LEAAKHYAYL IKHGIKDYRV
FSNYGIFLNE IGKHKEAELE LKKAISLNPK YANAYYNLAV LFIGQGNLGK AELELKKAIK
LKSDFAIAYY NLGFILKDLG RLKEADSYNQ KAVEIDPHLT DAYLSLSTMY SGDKTPKWHN
QLFSESLIKN KNNRELINIF FARSNIFHRE GKYQESAENL INANNIKLRL NKSEANLLIN
KTKKLKISSD NYERKNKAFG NYPMSIFIVG LPRCGSTLVE SIISLNSHVR DLGEVNIFEK
SYREYKESEK KTDLSEIYWK KLEITKNKRS TTNKWLFNYQ YAGIIAQAIP NAKIIHCYRN
PLDNILSMYR AHFATGNNFS SSLVDSVAVY SDQEEIMKIY KKEFKNHIYE LNYDKLVTHP
SEEIKSLILW LGWKWNDLYL SPHLNNRKVS TRSNVEVRSP ITTKSLGGWK NYKEMLRPAM
EIITQKDQYK DLKY
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