Gene PMT9312_0026 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPMT9312_0026 
Symbol 
ID3764807 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameProchlorococcus marinus str. MIT 9312 
KingdomBacteria 
Replicon accessionNC_007577 
Strand+ 
Start bp27324 
End bp27884 
Gene Length561 bp 
Protein Length186 aa 
Translation table11 
GC content39% 
IMG OID637796529 
Productelongation factor P 
Protein accessionYP_396523 
Protein GI78778411 
COG category[J] Translation, ribosomal structure and biogenesis 
COG ID[COG0231] Translation elongation factor P (EF-P)/translation initiation factor 5A (eIF-5A) 
TIGRFAM ID[TIGR00038] translation elongation factor P 


Plasmid Coverage information

Num covering plasmid clones20 
Plasmid unclonability p-value1 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGATCTCCA GTAACGATTT TCGCACAGGT ACCACCATAG AATTGGATGG ACAAGTTTGG 
CGTGTTGTAG AATTTCTACA TGTCAAGCCT GGTAAGGGTT CTGCTTTCGT GCGAACAAAA 
TTAAAATCAG TTCAAAGCGG CAACGTGGTT GAAAAAACTT TTCGAGCCGG AGAATCAGTA 
CAGCAGGCTA TCCTTGAGAA GTCTAACCTG CAACACACTT ATGTGGAGTC TGGAGATTAC 
GTTTTTATGG ATATGACAAG TTTTGAAGAG ACAAGACTTT CCTCTGAACA AATCGGTAAA 
GGCTCAAAGT ATTTGAAAGA AGGAATGGAG GTTAATGTAA TTTTACATAA TGGTAAAGTT 
TTAGAAGTGG AACTTCCAAT TTCTATTACT TTGAAAGTTA CAGAGACTGA TCCTGGAGTT 
AAAGGCGATA CTGCTAGTGG GGGCACGAAA CCAGCTATTC TAGAAACTGG TGCTCAAGTT 
ATGGTTCCTT TATTTATTTC TGTGGGAGAA ATGATTAAAG TTGATACACG TAACGACAGT 
TATCTTGGAC GTGAAAATTA A
 
Protein sequence
MISSNDFRTG TTIELDGQVW RVVEFLHVKP GKGSAFVRTK LKSVQSGNVV EKTFRAGESV 
QQAILEKSNL QHTYVESGDY VFMDMTSFEE TRLSSEQIGK GSKYLKEGME VNVILHNGKV 
LEVELPISIT LKVTETDPGV KGDTASGGTK PAILETGAQV MVPLFISVGE MIKVDTRNDS 
YLGREN