| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PMT9312_0022 |
|---|
| Symbol | |
|---|
| ID | 3764803 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Prochlorococcus marinus str. MIT 9312 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_007577 |
|---|
| Strand | - |
|---|
| Start bp | 22584 |
|---|
| End bp | 23993 |
|---|
| Gene Length | 1410 bp |
|---|
| Protein Length | 469 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 28% |
|---|
| IMG OID | 637796525 |
|---|
| Product | UDP-N-acetylmuramate--L-alanine ligase |
|---|
| Protein accession | YP_396519 |
|---|
| Protein GI | 78778407 |
|---|
| COG category | [M] Cell wall/membrane/envelope biogenesis |
|---|
| COG ID | [COG0773] UDP-N-acetylmuramate-alanine ligase |
|---|
| TIGRFAM ID | [TIGR01082] UDP-N-acetylmuramate--alanine ligase |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 17 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | TTGGATAAAG AATTACTGTC GAAGAGTCAT TTTCATTTTA TTGGAATTGG AGGTATTGGA
ATGTCAGGAG TTGCAATAGG TTTGCTCAAA AAAGGTTATT CAGTTTCAGG ATCTGATTTA
GTTAAAAACA ATGAAACTAA TAAATTAGCG CAATTAGGCG CAGTAATCTT TAATTCTCAA
ATTCGACAGA ATATTGAATT TGTAACTTCA AAATTTAACA ACAAATTGAT TAATTTTGTT
GTAAGCTCCG CGATTAAGCC AGAAAATGAA GAATTTTCTT ACTGTAGAAA AAAAAATTTA
ACAATAAAAC ATCGTTCAGA GATACTTGCA ATGTTAATGC AAACCTACAC TACATTGGCC
GTAGCAGGTA GTCATGGAAA AACATCAACC AGTACATTTC TATCGACACT TCTTGAATTA
TGTACGCATA ATTCTTCTTC AATAACTGGG GGAATAATTC CTATCTACAA TTCTAATTGT
CATTTAGCAA ATACAAAATT CTTAGTAGCT GAAGTTGATG AATCTGATGG AACAATTAAT
AAATATAAAT CTGATATTGG ATTAATTAAT AACATTGATT TTGATCATTG CGATCATTTT
TCTGATTTAG GTGAAGTTAT ATCTTCTTTT AAAGATTTCG CTGCAAATTC TAAAAAATTA
TTACTTAATT TTGATTGTGT AACTACCAGA AGTAATTTTT ATTCTGAGAA TAATTGGTCA
AATATTACAG CCAATAAAGC AGCTTATGCC ATAATCCCAA CTGAAATTAA TGAAAGTCAT
ACAATTGGTA AATATTATGA AAATGGAAAT TTCATTAGTA GTTTAGATAT TCCAATCCCA
GGATTACACA ACCTATCTAA TATCACAGCT GCAATAGCAG CTTCAAGAAT GATAGGTGTA
GATTTTTTAG AAATTAAAAA AAATATTAAA TATCTTAAAC TTCCAAAAAA AAGATTTGAA
TTCAGAGGTC AAGTAGATGA AAGAAATTTA TATGATGATT ATGCACATCA CCCAAACGAA
ATAAAAGCAA CAATTAAATT AGGAAGATTA TTTATTAATC ACAAACGTAA TAATGAATCA
CATAATGGAA GATTAATAGC AATATTTCAA CCTCACAGAT ACTCTAGAGT AAAGCAATTT
GCAAAAGAAT TTGCTTTAGA ATTATCAAAA GCAGATATTA TTTACATAAC TAGTATTTAT
GCCGCAGGAG AAGGAAACGA AGATAACATT AATTCAACAA TTATTACTGA TCTGATATAT
AAACAAAACA AAAATGTTAG TTACATCAAT AATTATCATG AAATTACAAA GAAGTTTTAC
GAATTAACTC AAAAAGGGGA TTTGATTTTG AATATGGGAG CTGGAGATTG TCATAATTTC
TGGTCAATTT TAAATGGTAA AAATAATTAA
|
|---|
| Protein sequence | MDKELLSKSH FHFIGIGGIG MSGVAIGLLK KGYSVSGSDL VKNNETNKLA QLGAVIFNSQ
IRQNIEFVTS KFNNKLINFV VSSAIKPENE EFSYCRKKNL TIKHRSEILA MLMQTYTTLA
VAGSHGKTST STFLSTLLEL CTHNSSSITG GIIPIYNSNC HLANTKFLVA EVDESDGTIN
KYKSDIGLIN NIDFDHCDHF SDLGEVISSF KDFAANSKKL LLNFDCVTTR SNFYSENNWS
NITANKAAYA IIPTEINESH TIGKYYENGN FISSLDIPIP GLHNLSNITA AIAASRMIGV
DFLEIKKNIK YLKLPKKRFE FRGQVDERNL YDDYAHHPNE IKATIKLGRL FINHKRNNES
HNGRLIAIFQ PHRYSRVKQF AKEFALELSK ADIIYITSIY AAGEGNEDNI NSTIITDLIY
KQNKNVSYIN NYHEITKKFY ELTQKGDLIL NMGAGDCHNF WSILNGKNN
|
|---|
| |