Gene PMT9312_0020 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPMT9312_0020 
Symbol 
ID3764801 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameProchlorococcus marinus str. MIT 9312 
KingdomBacteria 
Replicon accessionNC_007577 
Strand
Start bp21314 
End bp21664 
Gene Length351 bp 
Protein Length116 aa 
Translation table11 
GC content31% 
IMG OID637796523 
Producthypothetical protein 
Protein accessionYP_396517 
Protein GI78778405 
COG category[S] Function unknown 
COG ID[COG0718] Uncharacterized protein conserved in bacteria 
TIGRFAM ID[TIGR00103] DNA-binding protein, YbaB/EbfC family 


Plasmid Coverage information

Num covering plasmid clones11 
Plasmid unclonability p-value0.0229091 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGGCGGGTT TTGGACTTCC TAACTTTGGA CAACTTACAG AAGCTTTTAA AAAAGCTAAA 
CAAATTCAAC AAGATGCTCA AAAATTACAA GATGAACTTG AAAATATGGA AATTGAAGGG
GAAAGTGATG ATGAAATGGT AAAAGTTTGG ATAAGTGGCA ACCAACTTCC TTTAAGGGTA
GAAGTTCAAG AAAATATTTT AAATTCAGAT AAAGAAAAAA TAGAGCAAAA TATTTTACAA
GCTATTCAAA AAGCTCATGA ATTATCTACT ACAACGATGA AAGAAAGAAT GAATGATTTG
ACTGGTGGTT TAAATCTTAA TCTTCCTGGT TTTGATAATA CTGACTCTTA G
 
Protein sequence
MAGFGLPNFG QLTEAFKKAK QIQQDAQKLQ DELENMEIEG ESDDEMVKVW ISGNQLPLRV 
EVQENILNSD KEKIEQNILQ AIQKAHELST TTMKERMNDL TGGLNLNLPG FDNTDS