Gene PMT9312_0019 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPMT9312_0019 
Symbol 
ID3764800 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameProchlorococcus marinus str. MIT 9312 
KingdomBacteria 
Replicon accessionNC_007577 
Strand
Start bp20431 
End bp21348 
Gene Length918 bp 
Protein Length305 aa 
Translation table11 
GC content26% 
IMG OID637796522 
ProductGTPase EngC 
Protein accessionYP_396516 
Protein GI78778404 
COG category[R] General function prediction only 
COG ID[COG1162] Predicted GTPases 
TIGRFAM ID[TIGR00157] ribosome small subunit-dependent GTPase A 


Plasmid Coverage information

Num covering plasmid clones10 
Plasmid unclonability p-value0.0464209 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAAAACTA ATAGTAAACA TTTAGGTTTA GTTACAAAAA AATTTAATGA TTTTTTTTTA 
GTTGACTTAA AAAATAAAGA AAACATTGGT AAGAGTAAAA AATTTTTGTG TAAGGTGAAG
AAGTCTATAA ATTTCAAGGA TCAATTTATT TATGTTGGAG ACGAAGTAAT AATTGATAAT
ATTGATTTAA GAAGTAAACG CGCATTAATA ACAAGTTTAA AAAAAAGAAA GAATTTATTA
ATCAGACCAT CAGTTGCAAA TATTTCTAAC ATATATATTA TTTTTTCCGT TAAAGAGCCA
GAGTTAAATT TATCTCAAGT TAATAGGTTT TTGATATCAG CAGAATCGAT GGGAGTTGAA
GTTTCATTAG TTTTGACAAA GTGTGATTTA ATATCAGAGA AAAAAAGGTC TTTTTTACTA
GATAAATTTG GCAAATGGGG TTACCAAACA ATTACTTTAA ATTTACAGAA ACCTAATTAT
TTAAAAAATT TATTAGTTGA GTTAAAGAAA AAAAAGTGTT CTATATTTAT GGGCCCATCT
GGTGTTGGTA AAACTACTTT GCTTAATATG ATAATTCCAG GTCTTCAAAA TATTACTGCT
CCAGTTTCTA ATAAAATTAA AAGAGGGAAA AACACTACTC GAAATGTTGA GTTATTTCCT
ATATCAAGTC AAAGTTACAT TGTGGATACC CCTGGTTTTA ATATGCAACC TCTAAAGGTT
GATATTAGAT TGTTACCAAA TCTCTATTCG GAAATATATA CACAAGTAAT TGATGATGGA
ATTAGGTGTA AATTTCGTAA CTGCTTACAT TTGAATGATG AGGGCTGTAA TTTAAATAAA
TCTTTTGAAA GATATTCTTT TTATAAAGAA ATGATTGAAT CTTCTAAGAG TCAGTATTAT
CAAAACCAGG AAGATTAA
 
Protein sequence
MKTNSKHLGL VTKKFNDFFL VDLKNKENIG KSKKFLCKVK KSINFKDQFI YVGDEVIIDN 
IDLRSKRALI TSLKKRKNLL IRPSVANISN IYIIFSVKEP ELNLSQVNRF LISAESMGVE
VSLVLTKCDL ISEKKRSFLL DKFGKWGYQT ITLNLQKPNY LKNLLVELKK KKCSIFMGPS
GVGKTTLLNM IIPGLQNITA PVSNKIKRGK NTTRNVELFP ISSQSYIVDT PGFNMQPLKV
DIRLLPNLYS EIYTQVIDDG IRCKFRNCLH LNDEGCNLNK SFERYSFYKE MIESSKSQYY
QNQED