Gene PMT9312_0016 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPMT9312_0016 
Symbol 
ID3764797 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameProchlorococcus marinus str. MIT 9312 
KingdomBacteria 
Replicon accessionNC_007577 
Strand
Start bp18338 
End bp19057 
Gene Length720 bp 
Protein Length239 aa 
Translation table11 
GC content32% 
IMG OID637796519 
Productheat shock protein GrpE 
Protein accessionYP_396513 
Protein GI78778401 
COG category[O] Posttranslational modification, protein turnover, chaperones 
COG ID[COG0576] Molecular chaperone GrpE (heat shock protein) 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones22 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGATTGAAA ATCAATCAGA CAATATTGAT ATTAAAGAAA ATGATGTTTT GAATCAGGAT 
AATGCCCCTG AGGATAATTC ATCTGCTGCA GAAAAAACAA TCGAAAATGA TGAATTATCT
CCACAAAAAA CAGAAGAAAT AAATACCGAA GAATTAAAAA ATACTATTTC CAATAATGAT
GCAAGGTTAG AACAGTTAGA AAAAGAGCAC GAAACATTAA AAAATCAATA TGTAAGAATT
TCAGCAGATT TTGATAATTT TAGAAAAAGG CAGTCTAGAG ATCAAGACGA TTTAAAAGTC
CAACTTGTTT CTAAAACTTT AACTGCAATA CTCCCTATTG TTGATAATTT TGAGAGAGCA
AGACAGCAAC TTAAACCAGA AAGTGAAGAA GCTCAAGCCC TTCATAGAAG TTATCAAGGA
TTGTATAAAC AATTGGTAGA AGTTTTAAAA CAACAAGGAG TTTCGCCGAT GAGAGTTGTT
GGTCAACAAT TTGATCCAAA TTTACATGAA GCCGTATTAA GAGAGCCTAG TGAAGAGTTT
AAAGAAGATT TGATTGTAGA AGAATTGCAG CGAGGATATC ATTTAGAGGG AAAGGTTTTG
AGACATGCTT TGGTTAAAGT TTCTATGGGA CATGGTCAAC AAAATTCACA AGAGGAAGTA
GAAAAGGATA CAGTTGAAGA GGATATTGAT TCAGAGGAAA ATACTTCTGA AGATGTATAA
 
Protein sequence
MIENQSDNID IKENDVLNQD NAPEDNSSAA EKTIENDELS PQKTEEINTE ELKNTISNND 
ARLEQLEKEH ETLKNQYVRI SADFDNFRKR QSRDQDDLKV QLVSKTLTAI LPIVDNFERA
RQQLKPESEE AQALHRSYQG LYKQLVEVLK QQGVSPMRVV GQQFDPNLHE AVLREPSEEF
KEDLIVEELQ RGYHLEGKVL RHALVKVSMG HGQQNSQEEV EKDTVEEDID SEENTSEDV