Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | PMT9312_0014 |
Symbol | |
ID | 3764795 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Prochlorococcus marinus str. MIT 9312 |
Kingdom | Bacteria |
Replicon accession | NC_007577 |
Strand | - |
Start bp | 16740 |
End bp | 17744 |
Gene Length | 1005 bp |
Protein Length | 334 aa |
Translation table | 11 |
GC content | 30% |
IMG OID | 637796517 |
Product | tRNA-dihydrouridine synthase A |
Protein accession | YP_396511 |
Protein GI | 78778399 |
COG category | [J] Translation, ribosomal structure and biogenesis |
COG ID | [COG0042] tRNA-dihydrouridine synthase |
TIGRFAM ID | [TIGR00742] tRNA dihydrouridine synthase A |
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Plasmid Coverage information |
Num covering plasmid clones | 24 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGAGTTCTA TTAAATCTAA TTCTATTAAA AATATTCATA AATTAAGTAT TGCTCCAATG ATGGATTGTA CTGATAAACA TTTCAGAATG ATAATGAGAA AAATAAGTTC TAAAGCTCTC CTATATACAG AAATGATTGT GGCCCAAAGT TTAATTTATA CCAATGAGAA AGAAAAATTT TTAGATTTTA ATAATGAAGA ACATCCGATC TCTATTCAAT TTGGTGGGGA TAATCCTAAA ATCCTTAAAG AGGGTGCCAA AATGGCACAA GATTGGGGTT ATGACGAAAT AAACTTTAAT GTTGGTTGTC CAAGTCCAAG AGTCTGTTCA GGCAATTTTG GCGCTTCACT TATGAAAGAT CCTGAAAAAG TAGCAAAATG CATAGAATCC TTAAAAAATA GCTGTAGCTT ACCGGTTACA ATTAAACACA GAATCGGTGT AGACGAAGAT GATAGTTTCG TAAATTTAAA TAATTTTGTA CGATACATAG CAAATGCTGG CGCAGACAGA TTTACAGTTC ATGCAAGGAA AGCCATATTA AAAGGTCTAA ATCCAAAACA AAACAGAACT ATTCCTCCAC TTAAATATGA TGTAGTAAAA AAATTAAAAA AATTAAATCC AGAATTGTTA ATAGAAATCA ATGGAGGTTT CACAAATATC AATGAATCAT TAGAAGCCCT AAGTAATTTT GATGGTGTAA TGATTGGACG ATCAGTATAT AAACATCCCT TAAGATGGTC TGAAATTGAT CAAAAAGTTT ATGGGATCAA TACAAAACCC AAATCTGCTT CAGATATCAT CTTCTCCTTA ATTCCATACA TAGAGGAACA TTTAAGTAAT GGAGGTAAAT CTTGGGATAT ATGTAAACAT CTTATTAATT TAGTCGAAGG TATTCCAAAA GCTAAAGTTT GGAGAAATCA AATTTCAACT AAATCTATAA AAAAGGAATT AGATATTGAT TATCTTCTTA AGTTAACTTC TAGACTTGAA GAAATGGGTT ATTAA
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Protein sequence | MSSIKSNSIK NIHKLSIAPM MDCTDKHFRM IMRKISSKAL LYTEMIVAQS LIYTNEKEKF LDFNNEEHPI SIQFGGDNPK ILKEGAKMAQ DWGYDEINFN VGCPSPRVCS GNFGASLMKD PEKVAKCIES LKNSCSLPVT IKHRIGVDED DSFVNLNNFV RYIANAGADR FTVHARKAIL KGLNPKQNRT IPPLKYDVVK KLKKLNPELL IEINGGFTNI NESLEALSNF DGVMIGRSVY KHPLRWSEID QKVYGINTKP KSASDIIFSL IPYIEEHLSN GGKSWDICKH LINLVEGIPK AKVWRNQIST KSIKKELDID YLLKLTSRLE EMGY
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