Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | PMT9312_0005 |
Symbol | |
ID | 3764786 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Prochlorococcus marinus str. MIT 9312 |
Kingdom | Bacteria |
Replicon accession | NC_007577 |
Strand | - |
Start bp | 5916 |
End bp | 8357 |
Gene Length | 2442 bp |
Protein Length | 813 aa |
Translation table | 11 |
GC content | 27% |
IMG OID | 637796508 |
Product | DNA topoisomerase IV subunit A |
Protein accession | YP_396502 |
Protein GI | 78778390 |
COG category | [L] Replication, recombination and repair |
COG ID | [COG0188] Type IIA topoisomerase (DNA gyrase/topo II, topoisomerase IV), A subunit |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 7 |
Plasmid unclonability p-value | 0.44739 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGGATAAGA AAAAATTCAC TTCTATCTCT CTCCAAGAAG AAATGCAACG TTCTTATTTG GAGTATGCAA TGAGTGTAAT AGTTGGTCGT GCTTTACCCG ATGCAAGAGA CGGTCTTAAG CCTGTACAAA GAAGAATACT TTTTGCAATG TATGAATTAG GTTTAACACC AGATAAGCCA TTTAGAAAGT GTGCCAGAGT TGTTGGAGAT GTACTTGGAA AATATCATCC TCATGGAGAT CAGGCAGTAT ATGATGCATT AGTCAGGCTA GTTCAAAATT TTTCAACTAA ATATCCTACT CTAGACGGCC ATGGGAATTT TGGATCTGTA GATAATGATC CGCCAGCAGC AATGAGATAC ACAGAGACCA GATTAGCACC GATATCACAT AAAGGATTTC TTGAAGAGAT AGATTCAGAA ACAGTAAATT TCTCAAATAA CTTTGACGGT TCACAAAAAG AACCAGATGT TCTTCCAGCC CAACTTCCAT TTTTATTATT GAACGGATCA TCAGGTATTG CAGTTGGAAT GGCAACAAAC ATTCCCCCCC ACAATCTAGG GGAAATAGTA GATGGTTTAA TTGCTCTAAT CAACAATAAA GAGGTAAGTA ATAAAAAACT TTCTAATATA ATTAAAGGAC CTGATTTTCC TACAGGGGGA GAGTTAATTT ATAGTCGTGC AATAGAAGAA CTTTACGCCA CAGGAAAAGG TTCAATCACA ATAAGAGGTG TCATAAATTC AGAAGCAATA AATTTAGGCA AAGGTAAACA TAAAAGAAAT GCATTAATCA TTACTGAACT TCCTTTTCAA ATCAGTAAGG CAGGATGGAT TGAAAAACTA GCAGAACTTG TTAATTCAAG CAAAATTAAT GGGATCTCTG ATATTAGGGA CGAAAGTGAT AGAGATGGAA TGAGAATTGT AATAGAGTTA AAAAAAGATT CTAATGCTGA ACTTGTAATT TCTAATTTAT ATAAAAAAAC TACTCTCCAA ACCAACTTTG GTGCCATTTT TTTAGCATTA ATAAAGGGCA AACCTGTCCA ACTAAACTTA AAACAATATC TAAACTATTT TCTTGAATTT AGAGAAGAAA CAATTAGAAA AAGAACTAAT TATTTTCTGA AAAACACTCT TGAAAAACTA GAAATATTAG AAGGTTTATC TAAAGCAACA AAAAACATCA AAAAAATTAT CGAGATTATT GAAGATTCAG AAAATTCTGC TGAAGCCAAA TCAAAATTAA TTGATATTTT CTACTTAAGT GCAAAACAGG CAAATTCAGT TTTGGATATG CCTCTAAAAA AATTAACAAA TCTGGAAAAA AATCAAATTG ATGAGGATAT AAGAAAATTA CAAGAAAAAA AAGATTATTT TCAAAATTTA TTAAATGAAA GAAAATTATT ACTTGAATTA CTAGTAGATG AATTATTAAT ATTAAAGAAA AAATATAATG TTAAAAGAAA AACAAAACTA CTTAAAAATA TTGATCAAAA TGAAGAATTA GAAACAATTA ATAATCAGAT ATTAGAAGAC TTTATCAATA AAAAAACTAA ATTATTTATA GACAACAGAT TATATTTAAG AAAGATGATT TTAAATAATT ATAAAAAATC GTTTGAAGAT GTAAATAAAA TTATAGATAA TAAAAACATT CAAAAATTCA TATGTAATAT CGATAAAAAT GTAAAAATAA TTGGGATCAC ATATACAGGA AAAGTTTTTC ATATTAATTG GGAGTCAAAT ATTAATAATG ACTATAAATT AGATAAAAAA ATCATTGGGA ATATTGATCA AAATAAAATA ATAAATTTTC ATTCAATAAA AAAGGGAATT AAAAATTATT TATGTATCTT AAATTCAGAT GGAAGATTTA AAAAAGTTTT GTTTGATGAA GATATGATTA AAAGTAATAG ATGTTTCTCA ATAACAAAAT TAAAAAATAA TATTAAAACA ATTGATTCAT TTATTTTTAG TGAAGAAAAA AATTTAATAA TATTAACCTC AATAGGAAGA ATGTTTAAAT TTAATTTATC AAACAAATTT TTAACCCCGA CTACTAAACA ATCGCAAGGA TTAATGCTTA CAAAACTTTT ACCAACTGAA AAAATTGTAT CTTGTTGTTC ATATCAAAAT GGAGAAAATA TTTACTTAGT TTCTAGAAAA GGGAAAATCT TTTGTATAAA TAGTAATGAA ATTTATTATG CCAATGAATA CAGTTTAGGA TATTTAAATG AAATTACTCA ACTTAAAAAC GATTACTTCC TAAAAATTTT GCCGAGTAAC CATTACCTTG ATATTGAAAC TAATAAAAAT AAATCTGCTA GGTTAAATTT TGATAAATTG AATTTTAAAT CTAAGAAAAC AAATTTTTTA ATTGACTTTT TAAAATTAGA CGATGAGGAA TATATTGAAA ATTGTTTTCA ACTCGAAAAC TTTCTTGACT AA
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Protein sequence | MDKKKFTSIS LQEEMQRSYL EYAMSVIVGR ALPDARDGLK PVQRRILFAM YELGLTPDKP FRKCARVVGD VLGKYHPHGD QAVYDALVRL VQNFSTKYPT LDGHGNFGSV DNDPPAAMRY TETRLAPISH KGFLEEIDSE TVNFSNNFDG SQKEPDVLPA QLPFLLLNGS SGIAVGMATN IPPHNLGEIV DGLIALINNK EVSNKKLSNI IKGPDFPTGG ELIYSRAIEE LYATGKGSIT IRGVINSEAI NLGKGKHKRN ALIITELPFQ ISKAGWIEKL AELVNSSKIN GISDIRDESD RDGMRIVIEL KKDSNAELVI SNLYKKTTLQ TNFGAIFLAL IKGKPVQLNL KQYLNYFLEF REETIRKRTN YFLKNTLEKL EILEGLSKAT KNIKKIIEII EDSENSAEAK SKLIDIFYLS AKQANSVLDM PLKKLTNLEK NQIDEDIRKL QEKKDYFQNL LNERKLLLEL LVDELLILKK KYNVKRKTKL LKNIDQNEEL ETINNQILED FINKKTKLFI DNRLYLRKMI LNNYKKSFED VNKIIDNKNI QKFICNIDKN VKIIGITYTG KVFHINWESN INNDYKLDKK IIGNIDQNKI INFHSIKKGI KNYLCILNSD GRFKKVLFDE DMIKSNRCFS ITKLKNNIKT IDSFIFSEEK NLIILTSIGR MFKFNLSNKF LTPTTKQSQG LMLTKLLPTE KIVSCCSYQN GENIYLVSRK GKIFCINSNE IYYANEYSLG YLNEITQLKN DYFLKILPSN HYLDIETNKN KSARLNFDKL NFKSKKTNFL IDFLKLDDEE YIENCFQLEN FLD
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