Gene Suden_2012 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSuden_2012 
Symbol 
ID3762997 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSulfurimonas denitrificans DSM 1251 
KingdomBacteria 
Replicon accessionNC_007575 
Strand
Start bp2095569 
End bp2096627 
Gene Length1059 bp 
Protein Length352 aa 
Translation table11 
GC content35% 
IMG OID 
Productsecretion protein HlyD 
Protein accessionYP_394521 
Protein GI78778206 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones31 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAAAATAT TATTACTATT AAGTGTTGCT TGTTTGAGCC TTTTTGCAAC TATTGAGATG 
AGCCAAAAAC AGCAAGATGA TTTAGGTATC AAAACTACAA AGGTTAAAAA AGCAACAAGT
ATAGAGTTTG GGGCATACAA TGCAAAAGTT ACTTTAGATG CAAAAGATAT CATATCTATC
GGGCTGGCAG TTGACTCGGT TGTTACAGAT ATATTTGTTA CAAAGTTACT ACATGTAAAG
AGAGGAGATA AGCTTCTCTC AATAAGAAGC AGTGAGCTTT TAAACCTTCA AAAAGATTAT
ATCAACGCTC TCTTAGAGAG TGAAAACTCG CTTAAAAATT ATCAAAGAGA TGAAAAACTC
TATCATGAGG GCATCATCTC ACAAAAAAAT CTATTTGCAT CACAAAAGGA GAGACTAAAC
TCTGAGATAA GGGTAAAGTT AAGTGAGGGT GAACTTCTTA TAAGTGGCTT TGATACTTCA
ATGCTAAAGA GAGTAAGAGA AACGCATAAA CTTATAGAGT CAATAACTAT CTTAGCACCA
AGAGACGCTC TAGTAGATTC AATAGATGTT AATGTCGGAG AGAAGGTGGA CTCAAGCAAA
ACTATGATGA AAATTTTTGC TGATTCTAAG AGATATTTGG AGTTACATGT ACCTATTGAT
ATTGCAAAAA ATATAGCTCT TGGAGATAGA TGCTACTTTG AAGACAAAAG CGCTAAAATC
GTAGCCATCT CAAATATAGC AGATGAAGAG ACACAATCCA TTGGCGTTAG AGCAATCATA
GAAGATGCAA AAGATGTAAT GATAAATAGA GTCTATTTTG CAAAGATAAA AAAGAGCGTA
GAGGGTGCAT TTGAAATTGC TAAGAGCGCT TTAGTTTACG AGCAAAACAG GGCATTAATC
TTTAAAAAAG TCTCAAATGG ATATGAGCCG CTCAGCGTTT TGATACTCAA AGAGAGCCCT
CAGAGCTATG TTATACAAGC GCACTTAAGT GAGAGTGATG AAGTTGTTTC AAGTTCAACT
TCCGCACTCC TTAGTGCTTT GGAGCATTTA GATGAGTGA
 
Protein sequence
MKILLLLSVA CLSLFATIEM SQKQQDDLGI KTTKVKKATS IEFGAYNAKV TLDAKDIISI 
GLAVDSVVTD IFVTKLLHVK RGDKLLSIRS SELLNLQKDY INALLESENS LKNYQRDEKL
YHEGIISQKN LFASQKERLN SEIRVKLSEG ELLISGFDTS MLKRVRETHK LIESITILAP
RDALVDSIDV NVGEKVDSSK TMMKIFADSK RYLELHVPID IAKNIALGDR CYFEDKSAKI
VAISNIADEE TQSIGVRAII EDAKDVMINR VYFAKIKKSV EGAFEIAKSA LVYEQNRALI
FKKVSNGYEP LSVLILKESP QSYVIQAHLS ESDEVVSSST SALLSALEHL DE