Gene Suden_2011 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSuden_2011 
Symbol 
ID3762996 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSulfurimonas denitrificans DSM 1251 
KingdomBacteria 
Replicon accessionNC_007575 
Strand
Start bp2092511 
End bp2095576 
Gene Length3066 bp 
Protein Length1021 aa 
Translation table11 
GC content38% 
IMG OID 
Productheavy metal efflux pump CzcA 
Protein accessionYP_394520 
Protein GI78778205 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones15 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAGTGAGA AACTAATAAA TTTTGTACTC TCTCAAAGAT TTTTAACTCT TTTGGTGGCT 
ATGGCAGTTT TTATTTTTGG GGCATCTTCT ATGTTAAAGT TACCAGTAGA TGCTTATCCA
GATGTGGCAC CAACACAAGT AAAAATCATA CTAAAATCTT CAGGAATGAC ACCCGCTGAG
ATGGAGTCTC GCGTAATGAT TCCAGTTGAG CAGAATCTTC AAAGTATTCC AAAACAACTT
ATAGTGCGCT CGCTTGCAAA GTACGGAATT TGCGATATCA CTATTGATTT TGAAGATGGG
GTTGATATCT ACTGGGCAAG ACAGCAAGTA GCACAAAGAC TTAGTGAAGT CAAAGATACT
CTACCAGAGA ATGTTTCAGG CGGGCTTGCT CCCATCACTA CACCTCTTGG TGAAGTTTTG
ATGTTTACGA TAGAGTCCGA TACGCTTGAT TTGATGCAAA AGAGGACACT TCTTGATTGG
GTTATAAACA AAAGAATCCG CTCTATTGAT GGAGTTGCAG ATACAAACGC TTTGGGTGGA
TATGTAAAAA CCTATGAGGT GACTCCTGAC TTTGCAAAGA TGAAGTTATA TAAAATCACA
GTGGATATGC TTCAAAGTGC TCTTAGTAAA AATAACAAAA ATGAGGGTGT CGGAAGACTC
TCTATAGGTG AGCAGAGCCT TTTCATAAGA ACTGAGGGAA GACTTAAAAA TCTCGAAGAT
ATCTCAACCC TTATTATAAA AAATGAAGAT GCAAGAGATG TCAGAATTAG CGATATTGCC
GAGGTAAATA TAGGTTCACT CACAAGAGGT GGGTTTGTAA CAAAAGATGG CAAAGAAGAG
GCGGTTGAGG GCTTAATTCT CTCACGAAAG GGAGTTGATA CTTCAGGAGT TTTAAAAAGA
GTAAAAGCTG AACTCAAAAG CATAGAAAAA GAGCTGCCAA AAGGTACAAC AATAAATATC
TTTTATGACC GCTCAGATTT AGTTTCAAAA GCTATAAATA CAGTTACAAA GGCACTCCTG
GAGGCTATGG CACTTATTAT TATAGTTTTG TATCTGTTTT TGGGGAGTTT CGCATCAGCT
TTTAGTGTAG CGATAATTTT ACCATTTGCC GCTATGATGA CTTTTATTGC TATGAGTTAT
TTTGGTATCA GTGCAAATCT TATGAGTCTT GGAGGACTCG CAATTGCTAT TGGAATGTTA
GTGGATGCTG GGGTTGTTAT GGTTGAGAAC ATTGCAGAGC ATTTACATGA TGAAAAGTAT
AAAGATGATT CAAAACTAAG TGTGGTTATG AGCTCGGCAA AAGAGGTTGC AACTCCAGTT
TTTACTGGGA TTTTAATCAT CATCATAGTT TTTCTACCAC TGCTAACGTT AGAGGGTTTA
GAGGGAAAAC TCTTTGTTCC AGTTGCTCTG AGCATAGTAT TTGCACTTAC TTCGTCGTTA
ATACTTGCTC TTACTTTTAT ACCTGTTGTG AGTTTTTATG TACTAAAAAA AGCTCCACAA
AAACCAGTTG CTTTGATGGT TTTTTTAGAG AAGCGATATG AGAAGATTTT GAGATTTTCA
CTCTCTCATC AAAATAGCCT CTTTGTGGCG GTCGGGATTT TATGGATAGC GGCAGTTGTA
GCTTACGTGG GGGTTGGAAA GACTTTCATG CCATCTCTTG ATGAGGGAAA TGTCATCATC
GGTATAGAGA AAAACCCCTC TATCTCACTT GAGGCGAGTC GTGATATTGA CTTGAAAATA
CAACAAGCCA TTATGAGAGA AGTCCCAGAG GTTCTCTCCA TAGTAGCTCG TGGCGGAAGT
GATGAGATAG GACTAGATCC CATGGGCTTA AATGATACAG ATACTTTTTT AGTCTTAAAA
CCAAAAGATG AGTGGAGAGT GCCATCAAAT GAGTGGCTTC TTGATGAGTT TAGAAGGATT
TTAGACGAGT TTGTAGGTAT TGAGTACAGC TTCACTCAGC CTATAGCTAT GAGAGTGTCT
GAAATGCTTA GTGGCTCAAG AGGAGATATA GTTGTAAATA TCTATGGTGG TGACACAGGA
AAATTAGAAG AGATAGCAAA AGAAGTAGTC AAAATAACAG AATCTATCAA AGGCAGTAGC
GATGTCTATA AAAAAGCTAA TGAAGGAGTT GCCTACTGGG AAATTGAGTT TAAAGATGAA
GCAATGGCAA GACTTGGAGT AAACAAAGAT GAACTCTCAA ACTACCTAAA AGCCAGCGTT
GATGGAATAG AAGTTGGAAT CATCCAAGAA GATTTAAGAC GCATTCCTTT GATGATAAAA
GGAGATAAAA TTCTTCAAAC AAGCATGAGT GAGAACATGA ATTTACAATA TGTGCTGGGT
AGTGGGCAGA GTGTAGAGAT TAATGAGCTT GTAGAGTTTA AAATGACACA AGGTCCAGTG
CAGATTGACC ATGAAAACAC CATGAGAAAG AGTCTTGTTC AGACAAATGT AGTAGGGCGA
GATTTGGTAG GATTTGTAAA TGAGCTTAGC TCTTTGATAG ATACAAAACT TCAACTTCCT
CAAGGCTATT TTGTAGAGTA CGCAGGTGAG TATCAAAACC AACAAAGAGC ATCAAAGCGC
CTCTCTGTCG TAATCCCGCT GAGTATCGTT CTTGTTTTTA TTTTACTTTT TGTAACATTT
AACTCCTCCT TGCAAGCTTT TTTAGTCTTA TTAAATATAC CATTTGCTCT TATTGGTGGA
ATTTATGGGC TTTACTATAC TGGGGAGTAT ATGAGCGTGC CAGCGAGTGT TGGGTTTATT
GCACTTATGG GTATTGCAGT TTTAAATGGA GTCGTGATGT TAGAGTACTT TAACAAACTA
CAAGGGAGCG TAGAAGATTC AAAGGAGCTA GTAATTCAAG GTTCACTAAG AAGACTTAGA
CCTGTTTTAA TGACAGCTTT TATTGCAGCT CTTGGACTTA TTCCGATGCT CTTTGCAACA
GGACCAGGCT CAGAGATACA GAAGCCTCTA GCTATAGTTG TTATAAACGG GTTAGTCTCA
TCAACTTTTT TGACTCTAGT CCTTTTACCA ATTTTGTATC ATAAATTTGT AGCAAAAAAA
TTATAA
 
Protein sequence
MSEKLINFVL SQRFLTLLVA MAVFIFGASS MLKLPVDAYP DVAPTQVKII LKSSGMTPAE 
MESRVMIPVE QNLQSIPKQL IVRSLAKYGI CDITIDFEDG VDIYWARQQV AQRLSEVKDT
LPENVSGGLA PITTPLGEVL MFTIESDTLD LMQKRTLLDW VINKRIRSID GVADTNALGG
YVKTYEVTPD FAKMKLYKIT VDMLQSALSK NNKNEGVGRL SIGEQSLFIR TEGRLKNLED
ISTLIIKNED ARDVRISDIA EVNIGSLTRG GFVTKDGKEE AVEGLILSRK GVDTSGVLKR
VKAELKSIEK ELPKGTTINI FYDRSDLVSK AINTVTKALL EAMALIIIVL YLFLGSFASA
FSVAIILPFA AMMTFIAMSY FGISANLMSL GGLAIAIGML VDAGVVMVEN IAEHLHDEKY
KDDSKLSVVM SSAKEVATPV FTGILIIIIV FLPLLTLEGL EGKLFVPVAL SIVFALTSSL
ILALTFIPVV SFYVLKKAPQ KPVALMVFLE KRYEKILRFS LSHQNSLFVA VGILWIAAVV
AYVGVGKTFM PSLDEGNVII GIEKNPSISL EASRDIDLKI QQAIMREVPE VLSIVARGGS
DEIGLDPMGL NDTDTFLVLK PKDEWRVPSN EWLLDEFRRI LDEFVGIEYS FTQPIAMRVS
EMLSGSRGDI VVNIYGGDTG KLEEIAKEVV KITESIKGSS DVYKKANEGV AYWEIEFKDE
AMARLGVNKD ELSNYLKASV DGIEVGIIQE DLRRIPLMIK GDKILQTSMS ENMNLQYVLG
SGQSVEINEL VEFKMTQGPV QIDHENTMRK SLVQTNVVGR DLVGFVNELS SLIDTKLQLP
QGYFVEYAGE YQNQQRASKR LSVVIPLSIV LVFILLFVTF NSSLQAFLVL LNIPFALIGG
IYGLYYTGEY MSVPASVGFI ALMGIAVLNG VVMLEYFNKL QGSVEDSKEL VIQGSLRRLR
PVLMTAFIAA LGLIPMLFAT GPGSEIQKPL AIVVINGLVS STFLTLVLLP ILYHKFVAKK
L