Gene Suden_2010 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSuden_2010 
Symbol 
ID3762995 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSulfurimonas denitrificans DSM 1251 
KingdomBacteria 
Replicon accessionNC_007575 
Strand
Start bp2091722 
End bp2092408 
Gene Length687 bp 
Protein Length228 aa 
Translation table11 
GC content38% 
IMG OID 
Productpseudouridine synthase, Rsu 
Protein accessionYP_394519 
Protein GI78778204 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones28 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGCAAAATA GCCTAAAAAG AGTCGATGCA CATCTCTCAA GTCTTGGATA CTGCACAAGA 
AGTGAAGCAA AGAGATTTTT AACAACAAAT AATGTTTCTG TTTATAATGA GAGAATTTTT
GATGTAACCA AAAAAGTTCA CCACTCAGAG ATAAGAGTAA ATGGCGAGCT CTTAGATGCA
GAGCGGTTAG TTATTCTTAT GAACAAACCT CATGGTGTTG TCTGCTCACA TAGCGATTCT
GGCGTGCTTA TATACTCACT TCTTCCACCA AGATGGCAAA GAAGAAATCC AAAAGTATCA
ACAATTGGCA GACTCGACAT AGATACAACA GGTGCAATTT TACTTAGTGA TGATGGTGCT
TTAAATCATA AGCTAACAAG CCCTAAGAGT GAAGTTACAA AAATATATGA GGTAACGCTC
GCACAAGCTT TAAGAGGAGA TGAGGCAGAG ATTTTTGCAA GCGGAGAGCT TCTCTTAAAT
GGCGAGAAAA AACCTCTACT ACCAGCCAAA ATGGAGGTGA TTGGACCCAT ACATGTAAGA
GTGGAAATTT GTGAGGGGAG ATATCATCAA GTAAAGAGAA TGTTTGCTTC TGTTGGAAAT
AGAGTTACAG CACTACATAG AGCTAGTTTT GGAGATTTTA GTGTAGAGGA TTTAAAACCC
TCAGAGTTTA GAGAAATCTC TCTTTAA
 
Protein sequence
MQNSLKRVDA HLSSLGYCTR SEAKRFLTTN NVSVYNERIF DVTKKVHHSE IRVNGELLDA 
ERLVILMNKP HGVVCSHSDS GVLIYSLLPP RWQRRNPKVS TIGRLDIDTT GAILLSDDGA
LNHKLTSPKS EVTKIYEVTL AQALRGDEAE IFASGELLLN GEKKPLLPAK MEVIGPIHVR
VEICEGRYHQ VKRMFASVGN RVTALHRASF GDFSVEDLKP SEFREISL