| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Suden_1931 |
|---|
| Symbol | |
|---|
| ID | 3763052 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Sulfurimonas denitrificans DSM 1251 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_007575 |
|---|
| Strand | + |
|---|
| Start bp | 2014740 |
|---|
| End bp | 2016515 |
|---|
| Gene Length | 1776 bp |
|---|
| Protein Length | 591 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 38% |
|---|
| IMG OID | |
|---|
| Product | ATP-dependent DNA helicase RecQ |
|---|
| Protein accession | YP_394440 |
|---|
| Protein GI | 78778125 |
|---|
| COG category | |
|---|
| COG ID | |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 22 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGAAATACA AACTACTCAA AGACAACTTT GGGCATAACA GTTTTAGAGA GCTTCAAGAA
GATGGTGTTA ATGCCATCTT AGATGGTCGT GACTTGCTTA TGATTTTACC AACTGGTGGC
GGAAAATCGC TTGTTTATCA GCTCCCTACA CTTCTGATGG ACGGCATAAG CATAGTTATA
TCGCCACTTA TAGCACTTAT GCAAGACCAA GTCTCTTCAC TTAGAGCGCA AGGAATGAGT
GCGCAGATGA TAAGCTCCGC ACAAAGCCGT GATGAAGTAG ATGAGATAAT CGCTCAAGCA
CAAAATGGCG AGTTAAAGTT TTTATATCTC TCTCCTGAGA GGCTAAACAA TCAAGCCACA
ATTGCGATGC TGCGAGGTTT AAATATAAAC TTCTTTGTAG TAGATGAAGC GCACTGTATC
TCACAATGGG GACATGAGTT TAGAGATGAT TATAGAGCGC TTGGGAACTT AAGAGCAAAC
TTTGCATCAA CTCCCATCTG CGCATTTACT GCAACTTCAA CAGAGCATGT AACTGAGGAT
ATACTGCGAG AGTTGAGATT TCAAAATCCG CTTCTCTTAA AGGGGAAAAT ATTTCGTAAA
AATATTTTTA TCTCTCTTGA GCGCAGAGTT GCAAATGGAC ACGAACAGCT CAAACTCTTC
TTAGCAAGAC ATAAAAAAGA GAGCGGAATC ATCTATGTAA GCTCAAGAAA AAAGGCAGAG
GAGTTAAGTC TCTTTCTCAA TAAAAGCGGT TATAAATCTC TGCCATATCA CGCAGGTCTG
CCTCAGCATG TAAGAGAGCA AAACTTCAAA ATTTTTGTAA ATGACAAGAT AGATATTATG
GTTGCAACCA TAGCTTTTGG AATGGGAATA GATAAGAGTA ATATCCGTTT TGTAGTTCAC
ATGTCACTTC CAAAATCATT AGAGAACTAC TATCAAGAGA TAGGACGAGC TGGGCGAGAT
GGGGATGACG CAGAGGTTAT TATGTTCTTT AATGCAGCTG ATCTTACTCA ACACAAAAGA
TTTTTGGATG ATATACAAAA TGAGGAGTAT AAAGAGCATC TAAGCCAAAA AATAGAGACT
ATCTACAAAT ACGCAACAAG TGAAATCTGT TTTCACAAGC AGATAGCCGA GTACTTTGAA
GATACGCTTG ATGAGTGTTT AACTGGGTGC GACAATTGCG CAAACTCTAA AGAGATTAGA
GAGAACATCA CAAAAGAGGC TCAGATGATT CTAAGTGCCA TCTATAAAAC AGAGCAGAAG
TTTGGAAAAA ACTACATTAT AGATATTTTA AGAGGTTCAA AAGAGCAAAA ACTCTTAGCT
AACAGTGCTG ATAAACTCTC TGTCTATGGG ATTGGTGAGA GTAGAGCCAA GCGAGTTTGG
TATGTTATCT TAGAGAGGCT CTTAGAGCTA AAAATAGTAT ATTTGGGTGA GTTTAGCGTT
CTCAAACTAA CACAAGAAGC CGCAGAGACA CTAAGAGGCA AAAAAGAGAT TTTTATAAGA
GCCTCAAGAC TACATGTAAG CGATAAAGCA AAGAGAGTAA AACCTAGAGA TGAAGAAGAT
TTCGATGCAG AACTATTTGA AAAATTAAAA GCAAAACGAA CACAAATCGC TGGTGAGCTA
AAAGTTCCAG CTTACATAGT CTTCTCAGAT AAAGTACTCA AAAATCTCTC CGTTGCAAAA
CCGCAAAACA GAGAGAATAT GTTAGAGGTA AACGGTGTTG CAGAGAAGAA GTTTCAGCTC
TATGGGGCGC AGTTTTTAGA AGTTTTTAAT AAATAA
|
|---|
| Protein sequence | MKYKLLKDNF GHNSFRELQE DGVNAILDGR DLLMILPTGG GKSLVYQLPT LLMDGISIVI
SPLIALMQDQ VSSLRAQGMS AQMISSAQSR DEVDEIIAQA QNGELKFLYL SPERLNNQAT
IAMLRGLNIN FFVVDEAHCI SQWGHEFRDD YRALGNLRAN FASTPICAFT ATSTEHVTED
ILRELRFQNP LLLKGKIFRK NIFISLERRV ANGHEQLKLF LARHKKESGI IYVSSRKKAE
ELSLFLNKSG YKSLPYHAGL PQHVREQNFK IFVNDKIDIM VATIAFGMGI DKSNIRFVVH
MSLPKSLENY YQEIGRAGRD GDDAEVIMFF NAADLTQHKR FLDDIQNEEY KEHLSQKIET
IYKYATSEIC FHKQIAEYFE DTLDECLTGC DNCANSKEIR ENITKEAQMI LSAIYKTEQK
FGKNYIIDIL RGSKEQKLLA NSADKLSVYG IGESRAKRVW YVILERLLEL KIVYLGEFSV
LKLTQEAAET LRGKKEIFIR ASRLHVSDKA KRVKPRDEED FDAELFEKLK AKRTQIAGEL
KVPAYIVFSD KVLKNLSVAK PQNRENMLEV NGVAEKKFQL YGAQFLEVFN K
|
|---|
| |