Gene Suden_1892 details

Gene Information

• Locus tag: Suden_1892
• ID: 3762629
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Sulfurimonas denitrificans DSM 1251
• Kingdom: Bacteria
• Replicon accession: NC_007575
• Strand: -
• Start bp: 1972411
• End bp: 1974378
• Gene Length: 1968 bp
• Protein Length: 655 aa
• Translation table: 11
• GC content: 37%
• Product: penicillin-binding protein 1A
• Protein accession: YP_394401
• Protein GI: 78778086

Plasmid Coverage information

• Num covering plasmid clones: 17
• Plasmid unclonability p-value: 0.477214
• Plasmid hitchhiking: No
• Plasmid clonability: normal

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

ATGAGAATTA TCAGAAATAT CTTCTTTACG CTCTTCTTAG CCGCTGTCTT AACCCCTTTT 
ATAGTTATTG GCTATTTTTT AAAAGAGTAT AGTTATGATA TATCTTCAGT TATTGAGTAT 
CACCCGCAAC TTACAACAAG AATATATGAC AGACATGGTG AAAAAATTGC AAATCTTTTT 
GAAGATGAGC ATAGATACTA TGCGAAATTT GATGAGATAC CTCCACGTGC TATTGAGGCG 
CTCTTAGCTA TTGAGGATAC CACTTTTTTT GAACACTCAG GGATTAATCT TGATGCTATT 
TTTAGAGCAA TTATAAAAGA TATGCAAGCT GGAAAAATGG TAGAAGGTGC AAGTACCATT 
ACTCAACAGT TAGTGAAAAA TAGACTTCTC ACAAGAGATA AAAAAATCTC AAGGAAGATA 
AAAGAGGTTA TATATGCTCT TAAAGTTGAA CTCTCTTTGA GTAAAGAGGA GATACTTGAG 
AGATATTTAA ATGAGATATA TTTTGGACAT GGTTACCATG GTATAAAAAC AGCAGCTGAT 
GGTTATTTTC ATAAAAATCT CAGTGAACTT ACATTAAAAG AGACAGCTCT TCTGGTAGGT 
CTTGCTAAAG CTCCAAGTAC TTATGCGCCA ACAAAAAATT ATGATATTTC TATGGGCAGA 
GCAAATCGCG TTATCTCAAG AATGCATGCA CTCGGATGGA TAGATGATGA TATGCAGACT 
AAAGCTTTGC TTGAGAAGCC AGAAGTTTTT GATGATACTC TAACACAAAA CAGTGCACCA 
TTTATTGTAG ATGAAGTACA AAGAATAGTT GCAGGAATTG GCATAAACGA TTTTAAATCA 
GGCGGATATG AGGTACATAC AACAATTGAT TTAAAACTTC AAGAAGCGGC AGAAGATTCG 
CTTAAAAAAG CTTACAATCT CTCTGTGGCA AGAATAGAAG CAAGTACACC CTCAAAAGAT 
AAACAGGGCA CAAAAACGGA CCTCTTAAAT GGCGCATTAG TATCAATAAA CCCAAAAAAT 
GGAGATATCT TAGCTCTTGT TGGAAGTGTT GATTATAAAA AAAGCTCGTA CAACAGAGCC 
ACTCAAGGAA GGCGTCAACC AGGTTCTGCT TTTAAGCCAT TTATATATCA AGTTGCAATT 
GATTTAGGCT ACTCTGGCGT GACAGAGTTG GTTGATATTG CAAGAACATA TACTTATTAC 
AAAGATGGAG AGGAGCAGAA GTGGCAGCCT AAGAACTATG AAAAGAGTTA TAAAGGACTC 
TTAACACTCA GAGAAGCACT GGTGCACTCA AGCAATCTAG CAACGATAAA TTTAGTAAAT 
GATATAGGAT TGCCACAACT ACTTAGAGAG TTTAAAAAAT TTGGTATTAA AAATCTTCCG 
CCAGATCTCT CTATAGCATT AGGAAGTATT ACTCTCTCCC CACTGCAATT GGCGCACTAC 
TATAGCTCTT TTGCAAATGA TGGGGTTCAG GTTGAACCAA CTCTTATACG AAATATCGAT 
AAAGGAGTTA CTACTATTTT TGAGAGTGAG TTAAAGAGCA AGTACATCAC AGACCCAGCT 
CAGGCGTATA TAATGACAAC TATACTGCGA GATGTTGTTG AGCGTGGTAC TGGACGCTCT 
GCTCGAGTTG ATGGTATTGA ATTGGCTGGA AAAACAGGAA CTACTAACAA AAATATGGAT 
GGATGGTTTG CAGGGTACTC TCCAAGTATT GAGACTGTTG TTTGGTTTGG AAATGATGAT 
AATACACCAA TGGATAGAAT AGAGACAGGT GGTAGAATAG CAGGACCAGC TTTTTCTATG 
TATTATGAGA AAGCTTTAGA GTTATACCCT CAGATTCCAA GGAAATTTGA AGCCCCTGAT 
GGAATCAAAG AGATTGTAAT AGATGGAAAA AAAGAGTACT TTAGCGACAC TTCAAAACCA 
CCTCGCATTG ACGCTGATTC AAATACAAAT GAGAAGCTAC TCTTTTAA 

 

Protein sequence

MRIIRNIFFT LFLAAVLTPF IVIGYFLKEY SYDISSVIEY HPQLTTRIYD RHGEKIANLF 
EDEHRYYAKF DEIPPRAIEA LLAIEDTTFF EHSGINLDAI FRAIIKDMQA GKMVEGASTI 
TQQLVKNRLL TRDKKISRKI KEVIYALKVE LSLSKEEILE RYLNEIYFGH GYHGIKTAAD 
GYFHKNLSEL TLKETALLVG LAKAPSTYAP TKNYDISMGR ANRVISRMHA LGWIDDDMQT 
KALLEKPEVF DDTLTQNSAP FIVDEVQRIV AGIGINDFKS GGYEVHTTID LKLQEAAEDS 
LKKAYNLSVA RIEASTPSKD KQGTKTDLLN GALVSINPKN GDILALVGSV DYKKSSYNRA 
TQGRRQPGSA FKPFIYQVAI DLGYSGVTEL VDIARTYTYY KDGEEQKWQP KNYEKSYKGL 
LTLREALVHS SNLATINLVN DIGLPQLLRE FKKFGIKNLP PDLSIALGSI TLSPLQLAHY 
YSSFANDGVQ VEPTLIRNID KGVTTIFESE LKSKYITDPA QAYIMTTILR DVVERGTGRS 
ARVDGIELAG KTGTTNKNMD GWFAGYSPSI ETVVWFGNDD NTPMDRIETG GRIAGPAFSM 
YYEKALELYP QIPRKFEAPD GIKEIVIDGK KEYFSDTSKP PRIDADSNTN EKLLF