| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Suden_1816 |
|---|
| Symbol | |
|---|
| ID | 3762803 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Sulfurimonas denitrificans DSM 1251 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_007575 |
|---|
| Strand | - |
|---|
| Start bp | 1897450 |
|---|
| End bp | 1899003 |
|---|
| Gene Length | 1554 bp |
|---|
| Protein Length | 517 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 37% |
|---|
| IMG OID | |
|---|
| Product | NADH dehydrogenase subunit M |
|---|
| Protein accession | YP_394325 |
|---|
| Protein GI | 78778010 |
|---|
| COG category | |
|---|
| COG ID | |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 5 |
|---|
| Plasmid unclonability p-value | 0.0000292544 |
|---|
| Plasmid hitchhiking | Yes |
|---|
| Plasmid clonability | hitchhiker |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGCTAGATC ATATATTATC GATTTTAATT TTCTTCCCAG CCTTAGCAGG TATTCTTGGG
TTTGTAGTTA ACAAAAACAG CATACGCTCT TATGGTGTAG CTGTTGCTAC AATTGAGTTT
GGACTTGCTA TGTGGCTATG GTTTGCATTT GATTCTACTC TATCTGGTAT GCAGTTTATG
GAACAGATTG CATTAGTTCC AGCTTTTGGT ATCAACTATA TAGTTGGTGT TGATGGAATC
TCTCTGTTTA TTATCATACT AGCGGCGTTC TTTACGATGA TAGGAATTGC TTCACTTGGA
GAGATGAAAG ATATTAAAAA CCTAATTATT ACGCTTCTGT TCTTGCAGAT GACTATGGTT
GGTGTCTTTG TTGCACTTGA TGCTATTGTA TTTTATCTCT TTTGGGAGTT GTCTCTTGTA
CCAATGTTAT ATATTATTGG TGCGTGGGGT GGACCGCTTA GAATTTATGC TTCAGTTAAA
TTTTTCCTAT ATACATTTGC AGGCTCGCTT GTCATGTTAG TAGGTATGCT ATTTATGGCA
TATTTTTACT ATCAAGCAAC AGGAGAGTGG AGTTTTGCAC TTCTTGACTG GTACCGTCTG
ATACTTCCAG AATCATTTCA AAATTGGCTC TTTATTGCTT TTTTCTTTGG TTTTGCTATC
AAAGTTCCAA TGTTTCCATT CCATACGTGG CTACCATACG CTCACGGTCA GGCACCTACT
ATTGGTTCAG TAATACTTGC GGCAATACTT CTTAAAATGG GTACGTATGC GTTTATTCGC
TTCTCTTTGC CACTTTTTCC AGATGCGTCA GTTTACTTTA TGTATCCAAT AGCAGTTTTA
GCAATTATTA TGATTATATA TACTGCAATG GTTGCTTATG CGCAAAAAGA TATTAAACAG
GTTGTTGCTT ACTCATCTGT ATCACACATG GGTGTAATTA TTTTGGGAAC GTTTGCACTT
AACGTTGAGG GTATTACAGG TTCAATCTTT TTAATGATAG CTCATGGAGT AGTCTCTGGT
GCGCTCTTTT TCCTTGTCGG TGTAATTTAT GACAGAAGAC ATACAAAACT AATGAGTGAA
TTTGGCGGTT TAGCTTCGGT TATGCCTCGT TATGCAACCA TCTTTGGAAT TATGCTTATG
GCTTCTGTGG GTCTGCCTCT TACTATAAAC TTTGTTGGAG AGTTTTTAAG TTTACTCGGC
TTTTACAAGC AGTCACACAT CTTAACACTC CTTGCAGGGA CTGCAATTAT AGTTGGTGCA
ATCTACATGT TATCTGCATA TAAAAAGATG TTCTTTGGAG TTGTGACTCA TGAGGAGAAC
AGAAATCTCC CAGATATAAA CAAAAGAGAG CTCTTAGCAC TTATTCCACT AACGATTATT
ACTATCTGGC TTGGAATCTA TCCAAAACCA ATTTTAGAGC CAATAAACAA AAGCGTTGAG
GGAGTTGTTA CTTTAATGCA TGAGAAATCT TTAACGCAAG AGGCAAAATT AAGAATACCA
AATGTCAATA AAGAGATGGA GCTTATTAGT AAATCGCAAA GGGAGGCACA CTAA
|
|---|
| Protein sequence | MLDHILSILI FFPALAGILG FVVNKNSIRS YGVAVATIEF GLAMWLWFAF DSTLSGMQFM
EQIALVPAFG INYIVGVDGI SLFIIILAAF FTMIGIASLG EMKDIKNLII TLLFLQMTMV
GVFVALDAIV FYLFWELSLV PMLYIIGAWG GPLRIYASVK FFLYTFAGSL VMLVGMLFMA
YFYYQATGEW SFALLDWYRL ILPESFQNWL FIAFFFGFAI KVPMFPFHTW LPYAHGQAPT
IGSVILAAIL LKMGTYAFIR FSLPLFPDAS VYFMYPIAVL AIIMIIYTAM VAYAQKDIKQ
VVAYSSVSHM GVIILGTFAL NVEGITGSIF LMIAHGVVSG ALFFLVGVIY DRRHTKLMSE
FGGLASVMPR YATIFGIMLM ASVGLPLTIN FVGEFLSLLG FYKQSHILTL LAGTAIIVGA
IYMLSAYKKM FFGVVTHEEN RNLPDINKRE LLALIPLTII TIWLGIYPKP ILEPINKSVE
GVVTLMHEKS LTQEAKLRIP NVNKEMELIS KSQREAH
|
|---|
| |