Gene Suden_1679 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSuden_1679 
SymbolpanB 
ID3762893 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSulfurimonas denitrificans DSM 1251 
KingdomBacteria 
Replicon accessionNC_007575 
Strand
Start bp1761971 
End bp1762762 
Gene Length792 bp 
Protein Length263 aa 
Translation table11 
GC content38% 
IMG OID 
Product3-methyl-2-oxobutanoate hydroxymethyltransferase 
Protein accessionYP_394191 
Protein GI78777876 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones28 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGGCAAAAA AAATGACAAT AACATCTATT AAAAAAAGCA AAGGGGTACA CCCTTTAGTT 
ATGATAACTG CTTATGATGC TCTTTTTGCA AGACTTTTAG AGCCAAGTGC AGATATGATT
TTAGTAGGCG ATAGTTTAAA TATGAGCTTT GCTGGAAGAG ATGATACTCT AAGTGCAACA
CTCTCTCAGA TGATATATCA TACAAATGCC GTTGCAAAAG GGGCAAAAAA TAGTTTTATA
ATTTGTGATA TGCCTTTTGG AACTTATACA AACAGAGATG ATGCTCTTAA AAATAGTATT
AAAGTTTTTC AAGAATCAAG CGCTGATGCC CTTAAGATAG AGGGTGGAGA GGATAAGGCA
GAGATAATTA GCCATCTCTG CTCAAATGGA ATCGCTGTGT GCGGGCATAT TGGACTCTTA
CCACAAGCTT TTAGAAGTGA GGGCGGGTAC AAAGTAAAAG GAAAAACAGA TGAGGAGAGA
ATTCAACTCA TAAGAGATGC TAAAGCCATA GAGAAGGCTG GCGCTTTTTG TATGGTAATA
GAGGGAGTAA AGGCTGATGT TGCCGCTCAA GTTGCTGCAA GTGTAAAAAT CCCAGTTATA
GGAATTGGCG CTGGCAGAGA TGTGGATGGA CAAGTTCTTG TATTTTCTGA CATGTTGGGA
CTATTTGAAG AGTTTACTCC AAAGTTTGTA AAAAAATATC TAGATGGTGC ATCTTTGGTT
AAAGAGGCAT TAAAAAGTTA TGCCGATGAG GTTAAAACAA GAGCGTTTCC TCAAGATATC
CACACCTACT AA
 
Protein sequence
MAKKMTITSI KKSKGVHPLV MITAYDALFA RLLEPSADMI LVGDSLNMSF AGRDDTLSAT 
LSQMIYHTNA VAKGAKNSFI ICDMPFGTYT NRDDALKNSI KVFQESSADA LKIEGGEDKA
EIISHLCSNG IAVCGHIGLL PQAFRSEGGY KVKGKTDEER IQLIRDAKAI EKAGAFCMVI
EGVKADVAAQ VAASVKIPVI GIGAGRDVDG QVLVFSDMLG LFEEFTPKFV KKYLDGASLV
KEALKSYADE VKTRAFPQDI HTY