| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Suden_1570 |
|---|
| Symbol | |
|---|
| ID | 3763164 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Sulfurimonas denitrificans DSM 1251 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_007575 |
|---|
| Strand | - |
|---|
| Start bp | 1644700 |
|---|
| End bp | 1646250 |
|---|
| Gene Length | 1551 bp |
|---|
| Protein Length | 516 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 34% |
|---|
| IMG OID | |
|---|
| Product | diguanylate cyclase |
|---|
| Protein accession | YP_394082 |
|---|
| Protein GI | 78777767 |
|---|
| COG category | |
|---|
| COG ID | |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 28 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGAATATCC AAACAATTAT AAAACAGAGT ATTAAAAGAT TAGAGCTAGA GGGCAAACTC
TTAACCCCAG ATTTTTATGC GGAAGCTTTT TGTAAAGAAG CTGCTAAAGC GGGTTACAAT
GTTGAGGATT GTACTAAATT AGATAAATTT AAGCTGATGT TAAATAAGGA TTTGCAAGAG
GAGCTTAAAA AATATCACAC AAAAACAATC TCCGAATTTA GCCATTTTTT AATATCAAAG
CTAAATAGAA CAATTCCCTC TCACTGCTCA AATTTACTAG AGTCGCAAAT ACAATTTACA
AAAAGAGTTC TTCAAACCAT TGAAGTTTTA CATAACAAGG AAGCATCAGA ACTCTCAATA
AAATGTTTTG ATTTGCTTAG CCGTGAGCCT TCTCCAGCTG AGATAGACCA GTATAGACAG
TTATGGGTAA ATTTTTTAAC AACTTATGAT GACACTTTTT TGCAAAATTT AAAACCACTT
GGCGATGTAG ATAGTAAAGA TTTAAAAAAA ACTATTGAGA ATTTAAATAT TCAAAACCTA
CCTATTGGTA AATCTGAGAC GTTTGAACTA TCAAAAGTCG CTTCACTTTT GGTGGCATCG
CTAGTTCCAT CAATTGCTTC AGATGTTAAT GAGAAGATAG CTGATATTAG TCAAAAAATT
CAAAAAGACC CATCTCTTTT AGAGAGCAGC ACTATTGAAA ATGATATAAA ATCTGCAATA
TTTTTAAGAA TTGCACTCGA TAAGCAGAGT GTTAAAGAGA TGATTGAGTC AATAGATGGA
GTTTTAGACA AACTCTCTTT AAGATTAATA GAGATGATTG AGAGTTCTGA TAGCTCGACT
GTAGAGATAC AAAAGATAAA AAAAGAGCTT GAGAGCTATA ACGAGAGTAG CAGTAGCAGT
ACAAATTTTG CACATGCACA TAAAAAACTC TATACGATAG CCATTGCACT AGAAGAGAAC
ACACAAGCAC TTACAAAAGA TCTTAAAAAA CATAGCAGTG AAGTTGGCAT ACTTAGTAAA
AAGATAGAGC ATTTAGAACA AGAGTTAGCA CGCGCTAGGG AGGAGTCAAA AGAGGACTTT
TTAACAAAGC TATTCAATAA ACGAGCATTA GAGGAGTTTA TGAATATCAA AGAGGCTGAG
TTTGAAAGAT ATGAAAAAAA CTTTACCGTT GTATTTTTTG ATCTTGACCA CTTTAAAGCT
GTAAATGACA CCTATGGACA TGATGCAGGT GATGCAGTTC TTGTTGCCTT TTCAAAAATA
CTTAAAAAAG ATGCAAGAAA TGTAGATATT GTAGGAAGAT ATGGTGGTGA AGAGTTTGTA
GCAATTCTTA GCGAAACAGA TACTGATGGA GGAATAGTTT TCGCTCAAAA GATTAGAAAC
AAAGTAAAAA ATGCTCGTTT TATGTATAAA AGTAATCGCA TAGAGCTTAG TGTGAGTGCG
GGTGTTAGCG AGAGGAAGAT TCATGCTTCA CTTCAAAGCA CGATGAAAGC AGCTGATGAA
GCTCTTTACA AGGCAAAAGA TAACGGTAGA GATAGGGTTG AGAGTAAATG A
|
|---|
| Protein sequence | MNIQTIIKQS IKRLELEGKL LTPDFYAEAF CKEAAKAGYN VEDCTKLDKF KLMLNKDLQE
ELKKYHTKTI SEFSHFLISK LNRTIPSHCS NLLESQIQFT KRVLQTIEVL HNKEASELSI
KCFDLLSREP SPAEIDQYRQ LWVNFLTTYD DTFLQNLKPL GDVDSKDLKK TIENLNIQNL
PIGKSETFEL SKVASLLVAS LVPSIASDVN EKIADISQKI QKDPSLLESS TIENDIKSAI
FLRIALDKQS VKEMIESIDG VLDKLSLRLI EMIESSDSST VEIQKIKKEL ESYNESSSSS
TNFAHAHKKL YTIAIALEEN TQALTKDLKK HSSEVGILSK KIEHLEQELA RAREESKEDF
LTKLFNKRAL EEFMNIKEAE FERYEKNFTV VFFDLDHFKA VNDTYGHDAG DAVLVAFSKI
LKKDARNVDI VGRYGGEEFV AILSETDTDG GIVFAQKIRN KVKNARFMYK SNRIELSVSA
GVSERKIHAS LQSTMKAADE ALYKAKDNGR DRVESK
|
|---|
| |