| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Suden_1566 |
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| Symbol | |
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| ID | 3763160 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Sulfurimonas denitrificans DSM 1251 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007575 |
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| Strand | - |
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| Start bp | 1639261 |
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| End bp | 1642233 |
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| Gene Length | 2973 bp |
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| Protein Length | 990 aa |
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| Translation table | 11 |
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| GC content | 38% |
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| IMG OID | |
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| Product | transcription-repair coupling factor |
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| Protein accession | YP_394078 |
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| Protein GI | 78777763 |
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| COG category | |
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| COG ID | |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 17 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGTCTCAAA GCAGACTATT TAACTACTAT AAAACCACAA AAAAATCAGA TTTAGAGATT
CTTCTTTGTG AGGATGCAAA AGAGGCACAA GAGCTAAAGA GTGTAGCTCT GTTTTTTGGA
AAAGAGGTTA TTGTTTTTCC AGATTTTAGA GCAACGCACG GCGATGATTT GAGAGTTTAC
AAAGAGGAGT TGCACCAGCT CTTTAGCTCT TTGAGAAATT ATTACAGCGC TAAAGTTAAG
CCATTAATTA TCTCTCCGCT AAAAACGCTA CTCTTTGAGA TGCCCCAAGA GTCTCTGCTT
AAATCAAGAG TTATAGAGTT TGGAGAAAAA ATAGAGTTTA GAGCCTTTCA ACAACAGATG
CTCCTTTGGG GATACAACTT TGTTGATATG GTTCAAGTTG AGGGCGAAAT CTCTTTTAGA
GGCGATATTA TCGACATATA TCCGCCATCA AGCAAAATGC CACTTAGAAT TTCACTCTTT
GATAATGAGA TAGAGCAGAT AAAGTATTTT GAGCTTGAGT CTCAAAGAAC GCAAAAAGAG
GAGTTAGAGA GTTTTGAACT TACTCCTGCT TTTTTCTCTT TGGATGAGAG CGAGTTTGAT
ATGTTAAATG AGAGAGTGCA AAAAAGTGAA TTTGACTCTC TTGTAAAAGA TATAGCATCT
CTTGGTCTAT GGCACCTTGA TGATAGTGGT GTAAACTTTT TAGAATCAAA AAATGTAAAG
CTATCAAGAG AGCTAAATGC ACCTCTTATA GACGCTTACG CACTAAATAA ACCAACAATT
TCAAGAGAGT GTTTTAATGT AGAGGTTTTA GAAGAGAGTG ATGATTTTAA AGAGATTTCT
GTCTCAGATT TGCACGCATT TTTAAAAGTT CATAAAGCTA AAAAAACTAC TATTATCGCC
TCAAATGAGG CAGTTATAAA ACAAGCTGGG CTTTTTGATG TTAGTGGATT GAAAATCCTT
TACGCTCCAT ATATCTTAAA TATCATGGGC AAAGATGAAC TTGTAATTTC ACTAAATAAA
CAAACTAAAA TTAAGCGAAG AAGAAAAAGC TCTATCTTGC TTGATGACCT TAAAGTAGGC
GATTATGTTG TCCATGAAGA TTATGGGGTT GGTATTTTTG AGGGGATTGA GCAGACAGAG
ATTCTTGGCG GGGTAAAGGA TTTTATAGTT ATAAAGTATA TCGGTGATGA TAAGATTTTG
CTTCCAGTGG AAAATCTCGA CGCCATTGAC CGCTATATCG CTTCTGGTGG GTCTGTTCCT
GTTTTAGACA AGCTTGGTAA AGGAAGTTTT GGCAAACTCA AAGAGAGCGT AAAAAAACGT
CTCCTTGAGA TAGCAGGGCA AATCGTAAAT ACAGCTGCTG CGAGAGAGCT TATCACTGCG
CCAAAAATAA ACGTTGATGA AGATGAGCTA AGAGCGTTTC AAAAGCTCTC AGGGTTTCTT
TATACAGATG ATCAGAGCCA ATCAATCAAC GAGATAATTA CCCAGATGAG CTCAGGGCAC
ATCATGGATA GACTTCTTAG CGGAGATGTT GGTTTTGGTA AGACAGAAGT TGCGATGAAT
ACTATCTTTG CAGCCTATAA ATCAGGCTTT CAATCGGCTC TTATAGTTCC CACAACACTT
CTCTCAGCAC AACACTACCG CTCGCTTCAT GAGAGATTTG ATGCACTTGG TATAAAGTGC
TCAAAACTGG ATAGATTTGT AAGTGCAAAA GATAAAACGA ACATCATAAA AGCACTCTCA
AGTGGAGATT TGGATGTAGT TGTTGGAACT CACACTCTCT TCGATCTTGA TTTTAAAAAG
CTCGGCGTGG TTATTATAGA TGAAGAGCAT AAGTTTGGGG TAAAGCAAAA AGAGAAGATT
AAAGAGCTTT ATCATAATGT TCATCTTCTC TCAATGAGCG CAACTCCAAT CCCGCGTTCA
CTAAATCAAG CACTAAGCTC CATAAAGACG ATGTCACAAC TACTAACTCC GCCAAGCCAA
AGACAGCCAG TTAGAACATT TGTAAAAGCG TATGAAGAGA AGCTCATAAA AGAGGTGCTA
CTTCGTGAGA TACGCAGAGG TGGACAGATA TTTTATGTGC ATAACTCCAT AGATCATATG
CCTATAAAAC TAGGCGAGTT AAAAGCACTT CTGCCATCAC TAAGAGTTGT TATGCTTCAC
TCAAAAATCT CTGCAACAGA TACAGAAAAA GAACTCTTAA AGTTTGAAGC AGGGGAGTAT
GACTTGATGC TTGCCACTTC AATCATAGAG TCAGGCATCC ACATGCCACG AGTAAATACG
ATTATAGTAG ATGGTGCAGA TAGATTTGGT ATGGCAGATT TGCATCAGCT TAGAGGGCGT
GTTGGACGCT CAAATGTTGA GGGCTTTGCC TACTTTATAG TTAATGACAA AGAGACGCTA
ACGGATGAGG CAAAAAAAAG ACTTTTAGCA CTTGAATCAA ACTCATTTTT GGGAAGCGGT
TCTGTTTTGG CTTACCATGA TTTAGAGATA CGTGGCGGTG GAAATCTCGT CGGAGATGCA
CAAAGCGGAC ATATAAAAAA TATAGGATAT TCGCTCTATC TAAGGCTTCT TGAAGATGCT
ATCAAACTAC TAAGCAATCA AATGGAAGTT GAAAAGGCAA AAGTAGATAT AAAGCTCACC
ATCTCAGCTT TCGTCTCAGA TGAAGTTGTA AAAGAGGATA GACTCCGTAT AGATATATAT
AGAAGACTCT CCTCTTGCAT AGATAGCGTT GAGATATATG AGATACAAGA AGAGGTAATT
GACAGATTTG GCGCACTTGA TGCTCCAACA AAACAGTTCT TTGAGTTAAT GGTTATAAAA
GTATTAAGTC TCTCAAAAGG GATAAAAAGT GTTTCAAACT ATGGACAAAA CATAACGATT
ACCTACATGG ATGAGAAAAA AGAGAGCATA AAATCAGACT CAAAAGATGA TGATGACATC
ATAAAAGCGG TGCTGAAGTA TTTGAGAGCG TAA
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| Protein sequence | MSQSRLFNYY KTTKKSDLEI LLCEDAKEAQ ELKSVALFFG KEVIVFPDFR ATHGDDLRVY
KEELHQLFSS LRNYYSAKVK PLIISPLKTL LFEMPQESLL KSRVIEFGEK IEFRAFQQQM
LLWGYNFVDM VQVEGEISFR GDIIDIYPPS SKMPLRISLF DNEIEQIKYF ELESQRTQKE
ELESFELTPA FFSLDESEFD MLNERVQKSE FDSLVKDIAS LGLWHLDDSG VNFLESKNVK
LSRELNAPLI DAYALNKPTI SRECFNVEVL EESDDFKEIS VSDLHAFLKV HKAKKTTIIA
SNEAVIKQAG LFDVSGLKIL YAPYILNIMG KDELVISLNK QTKIKRRRKS SILLDDLKVG
DYVVHEDYGV GIFEGIEQTE ILGGVKDFIV IKYIGDDKIL LPVENLDAID RYIASGGSVP
VLDKLGKGSF GKLKESVKKR LLEIAGQIVN TAAARELITA PKINVDEDEL RAFQKLSGFL
YTDDQSQSIN EIITQMSSGH IMDRLLSGDV GFGKTEVAMN TIFAAYKSGF QSALIVPTTL
LSAQHYRSLH ERFDALGIKC SKLDRFVSAK DKTNIIKALS SGDLDVVVGT HTLFDLDFKK
LGVVIIDEEH KFGVKQKEKI KELYHNVHLL SMSATPIPRS LNQALSSIKT MSQLLTPPSQ
RQPVRTFVKA YEEKLIKEVL LREIRRGGQI FYVHNSIDHM PIKLGELKAL LPSLRVVMLH
SKISATDTEK ELLKFEAGEY DLMLATSIIE SGIHMPRVNT IIVDGADRFG MADLHQLRGR
VGRSNVEGFA YFIVNDKETL TDEAKKRLLA LESNSFLGSG SVLAYHDLEI RGGGNLVGDA
QSGHIKNIGY SLYLRLLEDA IKLLSNQMEV EKAKVDIKLT ISAFVSDEVV KEDRLRIDIY
RRLSSCIDSV EIYEIQEEVI DRFGALDAPT KQFFELMVIK VLSLSKGIKS VSNYGQNITI
TYMDEKKESI KSDSKDDDDI IKAVLKYLRA
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