Gene Suden_1530 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSuden_1530 
Symbol 
ID3763291 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSulfurimonas denitrificans DSM 1251 
KingdomBacteria 
Replicon accessionNC_007575 
Strand
Start bp1601913 
End bp1604324 
Gene Length2412 bp 
Protein Length803 aa 
Translation table11 
GC content36% 
IMG OID 
ProductCheA signal transduction histidine kinases 
Protein accessionYP_394042 
Protein GI78777727 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones19 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGGATGAAT TTCAAGAGAT ATTACAAGAT TTTTTAGTTG AATCTTTCGA GCTTATAGAG 
CAGCTAGATC AGGATTTAGT TGAGTTAGAA ACAAGACCAG ATGATTTAGA ACTCTTAAAT
AGAATATTTC GTGTAGCACA TACCGTAAAA GGCGCTTCAT CATTTTTAAA TTTTGATGTT
TTAACTCATT TAACTCACCA TATGGAAGAT GTATTAAACA GAGCTAGACA TGGGGAACTT
GTCATTCTTC CAGCTATTAT GGATGTTATC TTAGAGTCTA TTGATTTGAT GAAAGCTCTC
TTGCATACTA TTCGTGATAC AAGTGCAGAT AGCGGAATTG ATGTCTCTGG CTGTGTTTCA
AGACTTGACA AATGTGCTAA AGGAGAGACA AATATAGAAG TTCCACAGAC AACTATATCT
ACACCTAAGG CGACGCAAAG TGAGCCAAAA GAGGTTAAAA AAGAAGTTGT AGTTGAGACG
CAAGAGAGTG ATGAACTTGA TTATGATAAT ATGGATGCAG ATGAGTTGGA AGCGGAGATT
GAGAGGCTTC TGAAGCAGAG ACAAGAAGAA GACAAGATAA AAAGAGAACA AAAAGCTACT
AATGAAGATG GTGCAACATC AGAGACAAAT GGCACTGAAG ATGAATATGT GCCTGTAGCA
AAAGCTCCAG CAGTAGTTAC TCCAGCAAGA AGACCTTCTT CTCTTGGTGA TGATTCTGAT
TCAAATGATG ATGCAAGAGC TGCCTCTCCA GCGAAAAAAC AATCTAATGT TGAACAGACT
ATTCGTGTTG ATGTTAAGAG GCTTGACCAT CTGATGAACC TTATTGGAGA GCTTGTTCTT
GCTAAGAATA GACTTATTAA AATAAACGAT GATGTTGAAG AACGTTATGA GGGTGAGAGC
TTTTTAGAAG AGCTAAACCA AGTTGTTTCT ATTGTTTCTA TTGTTACGAC TGACTTACAA
ATCGCAGTTA TGAAAACAAG AATGCTTCCA ATTGGCAAAG TATTTAACAA ATTCCCTAGA
ATGATTAGAG ATTTAAGTAG AGAACTTAAC AAAAAAATAG AGCTTGAGAT ATCTGGTGAA
GATACAGAAC TTGATAAATC TATTGTAGAA GAGATAGGCG ACCCTTTAGT TCACATTATC
AGAAATTCGT GTGATCATGG TGTTGAAATG CCTAAAATCC GTCTTGAACA AGGCAAAAGT
GAAACAGGTA CTATTAAGTT AAAAGCTTAT AATGAAGGCA ACCAAATCGT TATTCAGATT
GATGATGATG GAAAAGGTCT TGATGTTGAC ATGTTAAAGA GAAAATCTTT AGAAAGAGGG
CTTATAACAG AAAAAGAAGC TGATAATATG AGCGATAAAG AGGCATTTGC CCTTATCTTT
AAGCCAGGCT TCTCAACAGC GACTGTTGTC ACAAACGTCT CAGGGCGTGG TGTTGGCATG
GACGTTGTAA AAACAAATAT AGAAAAAGTA AACGGAATCA TAGATATAGA TAGCGAACTT
GGTATTGGAA CTTCTATGAA GTTAAAGATA CCACTTACTC TAGCTATTAT TCAAGCACTT
TTAGTTGGTG TTCAAGAGGA ACACTATGCT ATTCCTCTTG CTTCAGTTTT AGAGACTGTA
AGAATATCAA AAGATGAAGT TTATACGGTT GAGGGACGCT CTGTTATGAG ACTTCGTGAA
GATGTTCTTT CTCTTGTTCA CATTGGCGAT ATTTTTGAAG TTGAGCGTAT TTTAGACTCA
AGTGAATATG CTTATGTTGT TGTTCTTGGT TTAGGAGCAA GTAAGCTAGG ATTAATAGTC
GATACTCTTG TTGGGCAAGA GGAGATAGTT ATTAAATCTT TAGGAGAGTT CTTAAAAGGA
ATAGAAGGCA TTGCAGGAGC TACAATACGT GGAGACGGCG GTGTGACACT TATAGTTGAT
GTTGTAGCGA TTATGGATAT GGCAAAACAT GTAAAAGCTA GTGCAATTAT TGATAGTACT
TCTGATGCAG CAATGTTAAC ACTCGAAAAA ACAAAAGCTA GTGATTATAA AATAATGATA
GTAGATGACT CAAAAACTGA TAGAACTATT ATGAGAAAAG CACTTGAGCC ACTTGGAGTA
ACATTGGTTG AAGCTGGTGA TGGACAAGAA GCTCTTGCTA TCTTAAAGCA GGGTGATCAT
AATTTTGATG CGATGCTTGT TGATATTGAG ATGCCGAGAA TGGATGGATA TTCACTAGCA
ATAGAGATTA AAAAATATAA CCGTTACAAA AATCTGCCTC TAATTGCGGT AACATCTCGT
ACTGGCAAAT CTGATAGAAT GCGCGGTGTT GAGTCTGGAA TGGTTGAGTA CATTACTAAG
CCATACTCTG CGGATTACTT AATGAGTGTA GTTCAAAGAA ACATTAATTT TAGATCGGAG
TTTTTAAAAT GA
 
Protein sequence
MDEFQEILQD FLVESFELIE QLDQDLVELE TRPDDLELLN RIFRVAHTVK GASSFLNFDV 
LTHLTHHMED VLNRARHGEL VILPAIMDVI LESIDLMKAL LHTIRDTSAD SGIDVSGCVS
RLDKCAKGET NIEVPQTTIS TPKATQSEPK EVKKEVVVET QESDELDYDN MDADELEAEI
ERLLKQRQEE DKIKREQKAT NEDGATSETN GTEDEYVPVA KAPAVVTPAR RPSSLGDDSD
SNDDARAASP AKKQSNVEQT IRVDVKRLDH LMNLIGELVL AKNRLIKIND DVEERYEGES
FLEELNQVVS IVSIVTTDLQ IAVMKTRMLP IGKVFNKFPR MIRDLSRELN KKIELEISGE
DTELDKSIVE EIGDPLVHII RNSCDHGVEM PKIRLEQGKS ETGTIKLKAY NEGNQIVIQI
DDDGKGLDVD MLKRKSLERG LITEKEADNM SDKEAFALIF KPGFSTATVV TNVSGRGVGM
DVVKTNIEKV NGIIDIDSEL GIGTSMKLKI PLTLAIIQAL LVGVQEEHYA IPLASVLETV
RISKDEVYTV EGRSVMRLRE DVLSLVHIGD IFEVERILDS SEYAYVVVLG LGASKLGLIV
DTLVGQEEIV IKSLGEFLKG IEGIAGATIR GDGGVTLIVD VVAIMDMAKH VKASAIIDST
SDAAMLTLEK TKASDYKIMI VDDSKTDRTI MRKALEPLGV TLVEAGDGQE ALAILKQGDH
NFDAMLVDIE MPRMDGYSLA IEIKKYNRYK NLPLIAVTSR TGKSDRMRGV ESGMVEYITK
PYSADYLMSV VQRNINFRSE FLK