Gene Suden_1447 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSuden_1447 
Symbol 
ID3763345 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSulfurimonas denitrificans DSM 1251 
KingdomBacteria 
Replicon accessionNC_007575 
Strand
Start bp1517149 
End bp1517832 
Gene Length684 bp 
Protein Length227 aa 
Translation table11 
GC content36% 
IMG OID 
Productorotidine 5'-phosphate decarboxylase 
Protein accessionYP_393959 
Protein GI78777644 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones21 
Plasmid unclonability p-value0.261218 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGCAACTTT GTGTAGCCCT TGATTTGCCA ACTAAAGAGG AAAATTTAGA ACTTATTGGC 
AAGATAAAAG ATTATGACGT TTGGTTAAAA GTGGGTTTGC GCTCTTACAT AAGAGATGGC
GAAGATTTTT TAAAAGATAT CAAAAAAATA AACCCTGATT TTAAAATATT TTTAGATCTA
AAACTATATG ACATACCAAA CACAATGGCT GATGCGGCAG AGTCTATCAT CTCTCTTGGT
GTTGATATGT TCAATGTTCA TGCGAGTGCT GGAAAAAGAG CGATGAGAGA GGTTATGGTT
AGACTTGAGC GATATGAAAA GCGCCCAATA GTTCTGGCAG TTACTGCTCT TACCTCATTC
AATGAAGATG AGTTTGGCAA AATATATGGA GATAGCATCT CAAAAAAAGC TGATCAGTTT
GCAAAAGATG CTTACGAGAG CGGGCTTGAT GGAGTGGTAT GTTCAGCTTA TGAGAGCAGT
TCTATAAAAA ACATTACAAA TAGAGATTTT ATGACACTCA CCCCTGGGAT TCGTCCTTTT
GGAGAAGATT CAGGTGATCA ACAAAGAGTA GCTGATGTAG CATTTGCAAA AAATGCACAT
GTAGATTTTA TAGTAGTAGG TCGCCCAATC TATAACTCTA AAAATCCAGC AGAAGTAATA
AGAAGAATAT TAGAGCAAAT TTAA
 
Protein sequence
MQLCVALDLP TKEENLELIG KIKDYDVWLK VGLRSYIRDG EDFLKDIKKI NPDFKIFLDL 
KLYDIPNTMA DAAESIISLG VDMFNVHASA GKRAMREVMV RLERYEKRPI VLAVTALTSF
NEDEFGKIYG DSISKKADQF AKDAYESGLD GVVCSAYESS SIKNITNRDF MTLTPGIRPF
GEDSGDQQRV ADVAFAKNAH VDFIVVGRPI YNSKNPAEVI RRILEQI