Gene Suden_1445 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSuden_1445 
Symbol 
ID3763380 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSulfurimonas denitrificans DSM 1251 
KingdomBacteria 
Replicon accessionNC_007575 
Strand
Start bp1512687 
End bp1513784 
Gene Length1098 bp 
Protein Length365 aa 
Translation table11 
GC content37% 
IMG OID 
Productsuccinyl-diaminopimelate desuccinylase 
Protein accessionYP_393957 
Protein GI78777642 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones13 
Plasmid unclonability p-value0.0181667 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAAAACAA TTGAACTTTT TAAATTTATG ATAAGCGCAA AGAGCCAAAC TCCAGATGAT 
GGCGGACTTT TAGATTTTAT ACAAAACTAT TTAGATGATT TTGAAGCGAT TAGAGTTGAT
GTTGAGGGTG TTAAAAACCT CTTTTTATAT AAAAAATTCT CACAAGGAGA TCACCTCTGT
TTCGCTGGAC ATGTAGATGT TGTTCCTGCT GGTGATGGAT GGGATAGCGA CCCATATATT
GCAACAGAGA GAGATGGTTA TATATATGGA CGTGGTGCGC AAGATATGAA GAGTGGCGTC
GCAGCATTTG TTCAAGCTAT AAAAGATACT AAACATTTTA ATGGAACTCT ATCCTTACTA
CTAACTTCAG ACGAAGAGGG AGAGGGAACA TACGGCACAA TCGAGGTTTT AAACTACCTT
AGGGATAAAA GTATGCTCCC AGATTTTGCA GTTGTTGCAG AGCCTACATG TGAGATGGTT
TTTGGTGATG CTATAAAAGT AGGGCGCAGA GGTTCAATCA ATGGCTATAT AACTCTAAGA
GGGAAGCAAG GACACGCCGC ATACCCCGAA AAATCTATAA ACCCTATAAA TCTAATCGCA
CCAAAACTTG CAAATATGGC TGGTGTAGAT TTGGATAACG GTGATGAGTT TTTTTCTCCA
AGCAAATTTG TTATAACAGA TATTAGAGCT GGGATGCAGG TTACAAATGT AACTCCAAAT
GAACTTAAGA TGATGTTTAA TGTAAGAAAT ACTACTCTTA CTTCTCAAAA AGAGATTAGA
GAGTTTGTTG AGAAAAACTT AGAAGATTTA GATTATGATT TGCGCCTTAC TCAAGGCTCT
TATCCTTTTA AAACAGATAC TAAAACAAAG CTTGTTAAAA ATATTGATGC CTCCATTGAG
CAAATCAGTG GCATAAAACC AAAACACTCA ACCGCTGGGG GAACTTCAGA CGCAAGACAT
ATGGCTCCGC TTGGCATAGA CGTTATAGAA TTTGGCGTAA TAAATGATAC AATTCACGCT
ATAAATGAGC GAACCACAAA AGATGAGGTT AAGAAACTTT ATGAAGTTTT TAAGCATCTT
ATAGATACGT GGAAATAA
 
Protein sequence
MKTIELFKFM ISAKSQTPDD GGLLDFIQNY LDDFEAIRVD VEGVKNLFLY KKFSQGDHLC 
FAGHVDVVPA GDGWDSDPYI ATERDGYIYG RGAQDMKSGV AAFVQAIKDT KHFNGTLSLL
LTSDEEGEGT YGTIEVLNYL RDKSMLPDFA VVAEPTCEMV FGDAIKVGRR GSINGYITLR
GKQGHAAYPE KSINPINLIA PKLANMAGVD LDNGDEFFSP SKFVITDIRA GMQVTNVTPN
ELKMMFNVRN TTLTSQKEIR EFVEKNLEDL DYDLRLTQGS YPFKTDTKTK LVKNIDASIE
QISGIKPKHS TAGGTSDARH MAPLGIDVIE FGVINDTIHA INERTTKDEV KKLYEVFKHL
IDTWK