Gene Suden_1358 details

Gene Information

• Locus tag: Suden_1358
• ID: 3763449
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Sulfurimonas denitrificans DSM 1251
• Kingdom: Bacteria
• Replicon accession: NC_007575
• Strand: -
• Start bp: 1428731
• End bp: 1430902
• Gene Length: 2172 bp
• Protein Length: 723 aa
• Translation table: 11
• GC content: 31%
• Product: diguanylate cyclase/phosphodiesterase
• Protein accession: YP_393870
• Protein GI: 78777555

Plasmid Coverage information

• Num covering plasmid clones: 16
• Plasmid unclonability p-value: 0.48099
• Plasmid hitchhiking: No
• Plasmid clonability: normal

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

ATGAATATAC CAAATAGAAC TAAGCGAAAT ACGCTTATGC TCGCACTCTT TATCTTACTA 
TCATCATCAT TGATTGCATA TCTGTTTTTA AACTATCAAC TTAAAAAATC CATAAATAGT 
GAGTTCGAGA GAGTTGTAGA ATCAACACAT AGACTCTTTG AAATCAATTT AAAAGATGAA 
AAAGAATATT TAGATATAAG CTTAGATGAG CTTCTCTTAA GTGATGGACT ATCTAAGGCT 
GTAGCAAATG GTGACTATAA AGCGATAGAC TCTATTGTCT CTCCATACTA TAAAAAATTA 
AAGCAGAGCA AAAAAGCTGT AAACATTTTA ACATTTCGCT CAGAGGATGG TATTACGCTT 
TATCGTGCTC ACAAGCCTGA ATTTTTTGGG GATAAGGTGA GCCAGCAGAG AAAACTCATA 
GCGGATACAA ATTTTTTTAA ACGTTCATTT GATGGTTTTG AAGTGGGTAA ATTTGAGATG 
ACATATCGTG TTACAAGACC AATATTTTAT AATGAAAAAT ATGTCGGGAA TTTAGAGCTT 
GGAATTTCAC CAGAGTATTT TTTACATGAA TTAAATGCGG TTTTTAAGAC GGAACTAGGC 
ATTGCTATTG ATAAAAAATT GCTTGATATT TTCTCCAATA AAGAAGAAAA AGGGACAGTA 
GCGATAGATG ATAGATATGT GTTAATTGAT AATAAACAAA ATTTAAAAAA ATATTTTATG 
GATGAGAATA GAAGTGAGAG TTTGTATAAA GTAAGCATGA ATATATCACT AAAAAATCAT 
CTCTCAGAGA GTCTTGGACA TTTGATTGTT GGTTTTGATA TTAGAGATAT AGCGGAGAAA 
AATACAAATT TTATATACAT GCTATTTTTT ATGATAGCTT TGATGATGTT TATTCTAGTA 
GGAATTTTGC ATTTTGGTTT CAATAAAATT CTCAAACACT TTTCAAAGCA GGTCTATAAA 
GATCATTTGA CAAATTTAAA AAATAGATAT GCACTAGATG ATGCTTTAAC TTCGCAAAAG 
AGTAAAGTAC TGATTTTAAG TAATATAAAA GAGTTTAGCC TTTTGAATGA ACTCTATGGT 
GTACATGTTG GAAATGAGAC GCTTATTCAA GTTGCACATG CTTTTAAAGA GTTTGCACAA 
GAGCACAGTT TTGAGGTATA TAGAATCTCT TCTGATGAGT ATGTCCTCTT GAAAAATGAT 
GAAAATTTTG ATGAAGATAG CTACTCAAAA CTTACAGAGG AGCTTCATTG TAAAATAAAT 
TCACTAAATA TAGTCATTCA TGGAGTTGAT GAAATTATTA GTATTGAGAT ATATTCTGGC 
ATTGCGCATG ATCATGCACA CTCCTTAGAA GATGCACAAA TGGCACTGAA GAAGGCTAAG 
AAGAACTCTT TGAGTTATAT GATATATTCA AAAAATGTAG ATACAAAAGA GTCATCACAG 
ACAATATTAA ATATTAAAAA AACTATTAAA CATGCTCTTG AGCATAAAAA TGTAGTTCCA 
TTTTTTCAAC CAATTACTGA TAAAAATGGA ACTATTGTGA AGTATGAGGC TCTTGTTAGA 
ATAGTAGAGT TTGATAATGG CAAAAAAAAC ATACTCTCTC CCGCAGAATT TTTAGATATA 
TCAATGAAAA GCGGCTCATA TATAAAAATA GCAAAAGAGA TGCTAGAACA AAGCTTCAGT 
ATCTTTGCCT CAAGAAGTGA GAAAATTTCT GTAAATTTTT TACCAAATGA TTTTTTAAAT 
CCATCTATCA TGGAAGCGCT AATAATAGGC ATAGAGAAGT TTGAATCACC AAATAGAGTT 
GTAGTAGAAA TTACAGAACA AGAGGGTGTT GAGAACTTTG AGAGACTCTT ACATGTTGTA 
AAAAAATTAA GAGATATAGG AATTTTGATT GCGATTGATG ACTTTGGAAG CGGTTATGCA 
AACTATGCAC ATATCTTGCA GATAAAACCA GATTATCTAA AGATAGACGG CTCACTTATA 
AAAGATATAC TAGAGGATAA TGAGTCAAGG ATTTTGGTTC AAAGCATCGT TAGATTTGCA 
AAAGAGTTAG GAATAACAAC AGTTGCAGAG TATGTTGAAA CCAAGGAGAT ATTTGAGCTT 
CTAAAGAGTT ACGGTGTGGA CGAATTTCAA GGCTACTATT TTGGTCGTCC AACCGATTTG 
ATAGGTGTTT AG 

 

Protein sequence

MNIPNRTKRN TLMLALFILL SSSLIAYLFL NYQLKKSINS EFERVVESTH RLFEINLKDE 
KEYLDISLDE LLLSDGLSKA VANGDYKAID SIVSPYYKKL KQSKKAVNIL TFRSEDGITL 
YRAHKPEFFG DKVSQQRKLI ADTNFFKRSF DGFEVGKFEM TYRVTRPIFY NEKYVGNLEL 
GISPEYFLHE LNAVFKTELG IAIDKKLLDI FSNKEEKGTV AIDDRYVLID NKQNLKKYFM 
DENRSESLYK VSMNISLKNH LSESLGHLIV GFDIRDIAEK NTNFIYMLFF MIALMMFILV 
GILHFGFNKI LKHFSKQVYK DHLTNLKNRY ALDDALTSQK SKVLILSNIK EFSLLNELYG 
VHVGNETLIQ VAHAFKEFAQ EHSFEVYRIS SDEYVLLKND ENFDEDSYSK LTEELHCKIN 
SLNIVIHGVD EIISIEIYSG IAHDHAHSLE DAQMALKKAK KNSLSYMIYS KNVDTKESSQ 
TILNIKKTIK HALEHKNVVP FFQPITDKNG TIVKYEALVR IVEFDNGKKN ILSPAEFLDI 
SMKSGSYIKI AKEMLEQSFS IFASRSEKIS VNFLPNDFLN PSIMEALIIG IEKFESPNRV 
VVEITEQEGV ENFERLLHVV KKLRDIGILI AIDDFGSGYA NYAHILQIKP DYLKIDGSLI 
KDILEDNESR ILVQSIVRFA KELGITTVAE YVETKEIFEL LKSYGVDEFQ GYYFGRPTDL 
IGV