| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Suden_1259 |
|---|
| Symbol | |
|---|
| ID | 3763680 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Sulfurimonas denitrificans DSM 1251 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_007575 |
|---|
| Strand | - |
|---|
| Start bp | 1328287 |
|---|
| End bp | 1330098 |
|---|
| Gene Length | 1812 bp |
|---|
| Protein Length | 603 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 38% |
|---|
| IMG OID | |
|---|
| Product | pyruvate carboxylase/oxaloacetate decarboxylase beta subunit |
|---|
| Protein accession | YP_393772 |
|---|
| Protein GI | 78777457 |
|---|
| COG category | |
|---|
| COG ID | |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 20 |
|---|
| Plasmid unclonability p-value | 0.911837 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGGCTAAGA AATTTATAGA TGTAATGGAT ACGACATTTA GGGATGGTTT CCAATCTGTC
TTTGGTGGTC GTGTATTAAT GGACGATTTT TTTCCAGCTG TAGAAGCGGC AAAGACTGCT
GGAATAACTC ACTTTGAGTT CGCTGGTGGC GCTAGATTTC AATCACTATA CTTCTATCTA
AGAGAAGATG CGTTTGAGAT GATGGATAGG TTTCGTAAGA TTGTAGGGCC AGATGCCAAC
CTTCAAACAT TGGCACGTGG TGTAAATACA GTTATGTTAG ATACAGGTTC AAAAGAGCTT
ATAGACTTAC ATGCAAAGAT GTTTAAAAAA CATGGTACAA CAACAATTAG AAATTTTGAT
GCACTAAATG ATGTGGAAAA TTTAAAATAC TCAGGAGAGA GAATTACTCA TCATGGACTA
AAACATGAAG TAGTTGTTAC CATGATGGAT TTGCCTCCTG GATGCTTTGG CGCACATACT
GTTGAATTTT ATGAAAAAAC TCTTCGTGAA ATTTTAGATA GTGAAATTCC ATATACTAGT
ATCTGTTTTA AAGATGCATC TGGAACATCA AACCCCCAAA AAGTGTTTGA AACTATACAA
ATGGCAAGAC GTCTTATTCC TGAGGGAACA CATTTAAGAC TACATACTCA TGAGACAGCT
GGTGTCTCGG TGGCTGCTTA TATGGCTGCT CTTGAGGCAG GAGTTGATGG TATAGATATG
GCAGCAGCTC CTGTTAGCGG TGGAACTAGT CAGCCAGATA TACTTACAAT GCTCCATGCT
ACAAAAGGAA TGAACTATGA CCTTGGTGGA TTAGAGATAA GTAAGGTTTT ATCATACGAA
AAAGAGCTTC AAAACTGCCT ATCTGACTAT TTTATGCCTC CTGAGGCTAC AATGGTTTCT
CCTATTATTC CATTTTCTCC CATGCCAGGC GGTGCACTTA CTGCAAATAC TCAAATGATG
CGTGATAATG GCATTATGGA TAAGTTCCCA GAGGTGATTG CTGCTATGAC TGAAGTTGTA
GAGAAGGGTG GGTATGGAAC ATCTGTTACC CCAGTTTCAC AATTTTATTT TCAACAAGCA
CTTAACAATG TAATGCAAGG TCCTTGGAAT GCAATAGCTC CAGGCTATGG AAAAATGGTT
CTTGGGTATT TTGGAAAAAC TCCAGTTGCT CCAGACCCTG AAGTTGTTAG AATTGCTTCT
GAGAAGTTAG GTTTAGCCCC AACAACAGAG AAAGCCCTAG ATTTAGCAAA TGCTGATGAG
AGCAAATCTT TGGCTACTTG GATAAATAGA CTAAAAGAAG AGAATATTGA GATTACAGAA
GAAAATATTT TTATCGCTGC TGCATGTCAT GACAAAGGTA TCGCATTTTT AAAAGGCGAT
GGCGAGTTAA GTGTTCGTAA AATATCAACT ATGAAAAAAG AAGAAGAAAA TAAATCACAA
GGGAGTTCAA GTATGGGAAG TGGAAATTAT ACAGTAGTAG TAGATGGTCA AAAGTTTAGT
GTTCAAGTTG CTGAGGGCGA TGTTAATATT CAAGTGACTG AAGTAAATGG CGAGAGCGTT
GAGCCATCAA AGCCAAAAGT TGTTACAACT TCAGGAACTC AACTTGACAT TAAAGCGCTT
CTCCCTGGAA GTGTATGGAA AATAGTTGCT AATCCAGGTC AAAGTGTAAA TGAAGGTGAT
GTGATTTTAA TTTTAGAATC TATGAAAATG GAGATAGATA TAGTAGCACC AAAAGGTGGT
GTTGTTAAGT CTATTAATGT TGCTACAAAT GATAAAGTAG TTGAAGGTCA AGTCGTAGCA
GTATTAGGTT AG
|
|---|
| Protein sequence | MAKKFIDVMD TTFRDGFQSV FGGRVLMDDF FPAVEAAKTA GITHFEFAGG ARFQSLYFYL
REDAFEMMDR FRKIVGPDAN LQTLARGVNT VMLDTGSKEL IDLHAKMFKK HGTTTIRNFD
ALNDVENLKY SGERITHHGL KHEVVVTMMD LPPGCFGAHT VEFYEKTLRE ILDSEIPYTS
ICFKDASGTS NPQKVFETIQ MARRLIPEGT HLRLHTHETA GVSVAAYMAA LEAGVDGIDM
AAAPVSGGTS QPDILTMLHA TKGMNYDLGG LEISKVLSYE KELQNCLSDY FMPPEATMVS
PIIPFSPMPG GALTANTQMM RDNGIMDKFP EVIAAMTEVV EKGGYGTSVT PVSQFYFQQA
LNNVMQGPWN AIAPGYGKMV LGYFGKTPVA PDPEVVRIAS EKLGLAPTTE KALDLANADE
SKSLATWINR LKEENIEITE ENIFIAAACH DKGIAFLKGD GELSVRKIST MKKEEENKSQ
GSSSMGSGNY TVVVDGQKFS VQVAEGDVNI QVTEVNGESV EPSKPKVVTT SGTQLDIKAL
LPGSVWKIVA NPGQSVNEGD VILILESMKM EIDIVAPKGG VVKSINVATN DKVVEGQVVA
VLG
|
|---|
| |