| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Suden_1251 |
|---|
| Symbol | |
|---|
| ID | 3763711 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Sulfurimonas denitrificans DSM 1251 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_007575 |
|---|
| Strand | + |
|---|
| Start bp | 1318864 |
|---|
| End bp | 1319946 |
|---|
| Gene Length | 1083 bp |
|---|
| Protein Length | 360 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 35% |
|---|
| IMG OID | |
|---|
| Product | pilus retraction protein PilT |
|---|
| Protein accession | YP_393764 |
|---|
| Protein GI | 78777449 |
|---|
| COG category | |
|---|
| COG ID | |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 35 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGACGCAAG AGACAAATCA GCAAATTGAT ATAAAAGAAT TGCTTAAGAG TGTTTTACAT
TTTGAATCTT CAGATTTGCA CCTTGTTGCT GGCAGTAAGC CTCAAATTAG GATAGATAAG
GCTCTAAAAC CACTTAATCT ACACGTTTTG AGCGCAAAAG AGATAGAAGA TATGGCTTAT
GCGCTTATAG AAGATAAGCA AAAAAAGATT TTTGAAGATA AAAATGAGCT TGATTTCTCA
TTTGAACTTG AGAATATTGG TCGTTTTCGT GCCAACTACT ATCGTACTAT TAGAGGGATT
GCATGTGCAT TTCGCACTAT TCCAGTAGAT GTACCGCCTC TTGAAAAATT TAACAATAAC
CCAATATTTA AAGAACTTAT AAAGAGAGAA AGAGGACTTA TTTTAGTCAC AGGTCCTACT
GGCAGTGGTA AATCAACTAC ACTTGCTTCA ATGCTTCATG AAATTAATCT CACTGAAAAT
AAACATATTA TTACAATAGA AGATCCAGTT GAGTTTGTTC ATACAAATAT TAACTCCATT
TTTTCGCAAA GAGAGATTGG CTCAAACACT AGCTCATTTG CAACAGCTCT TAAATTTGCT
CTACGACAAG ATCCAGATGT AATACTAGTT GGTGAGATGA GAGATAAAGA GACAATTTCT
GCAGCCCTTA CTGCAGCTGA GACAGGTCAC ATCGTTTTTG GGACACTCCA TACAAACTCT
GCACCTTCAA CAATAAACCG TATTATTGAT GTTTTTGATG CCAAAGAACA AGCACAAGTC
AGAGCACAAC TTGCATCTTC GCTTATATCT GTAATTTCTC AATCTCTTAT ACCAAGAGTT
AGCGGAGGAA TTATAGCTAC CCAAGAAATT TTAATAGCAA ATACAGCCAT TCAAAACTTA
ATCAGAGAGG ATAAGGTTCA TCAAATCTAC TCTCAAATGC AGCTAAATCA AAATGAGACA
CATATGACTA CTCAGACAGA TCAGCTAACA ACTCTATTGC GTAAAGGAAT TATCTCAAAA
GAGAGTGCAA TAAAAGCTTC AAACAGACCA GAAGAGCTTA TTAGAATCAT TCATAACCTT
TAG
|
|---|
| Protein sequence | MTQETNQQID IKELLKSVLH FESSDLHLVA GSKPQIRIDK ALKPLNLHVL SAKEIEDMAY
ALIEDKQKKI FEDKNELDFS FELENIGRFR ANYYRTIRGI ACAFRTIPVD VPPLEKFNNN
PIFKELIKRE RGLILVTGPT GSGKSTTLAS MLHEINLTEN KHIITIEDPV EFVHTNINSI
FSQREIGSNT SSFATALKFA LRQDPDVILV GEMRDKETIS AALTAAETGH IVFGTLHTNS
APSTINRIID VFDAKEQAQV RAQLASSLIS VISQSLIPRV SGGIIATQEI LIANTAIQNL
IREDKVHQIY SQMQLNQNET HMTTQTDQLT TLLRKGIISK ESAIKASNRP EELIRIIHNL
|
|---|
| |