Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Suden_1180 |
Symbol | |
ID | 3763729 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Sulfurimonas denitrificans DSM 1251 |
Kingdom | Bacteria |
Replicon accession | NC_007575 |
Strand | - |
Start bp | 1237927 |
End bp | 1239075 |
Gene Length | 1149 bp |
Protein Length | 382 aa |
Translation table | 11 |
GC content | 35% |
IMG OID | |
Product | carboxynorspermidine decarboxylase |
Protein accession | YP_393693 |
Protein GI | 78777378 |
COG category | |
COG ID | |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 20 |
Plasmid unclonability p-value | 0.477804 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
| |
Sequence |
Gene sequence | ATGAATACTC AAGAGAGCAT TTCTACACCA TACTACATGT GTGATGAGTC ACTTCTTCGT GCAAATCTTG AGATATTAGA TTATGTGCAA AAGCAGAGTG GAGCTAAGAT AATTTTAGCT CTAAAAGGTT TTGCCATGTG GAGTACATTT CCGCTTGTAA AGCAGTACTT AAGAGGTTGT ACATGTAGTG GACTTCATGA AGCACTTTTG GCTAGAGAAG AGTTTGCAAA AGAGGATAAA AATCTTGAAG TTCATACCTA CTCGCCAGCT TTTAAAGATG AAGACATTGA TGAGATTGCA CGCATATCTA ATCACATAGT TTTTAACTCA CCAACTCAAC TCTTTAAATA TTGCGATAGA GTAAAAAAGA TAAATCCACA TGTTAATCTA TCACTTAGAA TAAATCCAGA ACAGTCATCT TCTCCAAAAG ACATTTACAA TCCTTGCGGG CTTTACAGCA GGCTTGGAAC AACTTTAGCA AATTTTGATG AGAGAGTTTT AGAACATATA GATGGACTGA ATTTTCACGC ACTTTGTGAG CAAGATGTTG ATGCCTTAGA GGATGTTTTA GTAGCTTTTG AAGAGAAATT TTCCAAGTAC TTTAAAAATA TGAAATATAT AAATTTTGGC GGTGGACACC ACATAACAAA AAAAGGTTAT GATGTTGATA AGCTTATAAA AATAATAAAA GAGTTTATAA CAAAATATGA CGTTGAAGTC TATTTGGAAC CTGGGGAAGC AGTTGGTTGG CAAACAGGTG TACTTGTAAG TAGTGTTTTG GATATTGTTC ACAACGGCAT AGATATAGCC ATTTTAGATA CTTCAGCTGA AGCTCATATG CCAGATACTT TAGCAATGCC ATATCGAGCT ATGGTTAGAA GAAGCGGCGA GGCTGGAGAG AAAAAGCACA CATACCGTTT TGGTGGAAAT ACTTGTTTAG CGGGAGACAT CATGGGTGAT TACTCTTTTG ATAAACCTCT ATATGTAGGC GATAAAGTTA TATTTGAAGA TCAAATTCAT TACACTTTTG TAAAAAACAC TACATTCAAC GGTATAAAGT TACCCTCATT GGTTATACTA AGAGAGGATA AAACTCTTGA TGTTATAAAA GAGTTTGGAT ATCAAGATTA TAGAAATAGA TTATCTTAA
|
Protein sequence | MNTQESISTP YYMCDESLLR ANLEILDYVQ KQSGAKIILA LKGFAMWSTF PLVKQYLRGC TCSGLHEALL AREEFAKEDK NLEVHTYSPA FKDEDIDEIA RISNHIVFNS PTQLFKYCDR VKKINPHVNL SLRINPEQSS SPKDIYNPCG LYSRLGTTLA NFDERVLEHI DGLNFHALCE QDVDALEDVL VAFEEKFSKY FKNMKYINFG GGHHITKKGY DVDKLIKIIK EFITKYDVEV YLEPGEAVGW QTGVLVSSVL DIVHNGIDIA ILDTSAEAHM PDTLAMPYRA MVRRSGEAGE KKHTYRFGGN TCLAGDIMGD YSFDKPLYVG DKVIFEDQIH YTFVKNTTFN GIKLPSLVIL REDKTLDVIK EFGYQDYRNR LS
|
| |