Gene Suden_1180 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSuden_1180 
Symbol 
ID3763729 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSulfurimonas denitrificans DSM 1251 
KingdomBacteria 
Replicon accessionNC_007575 
Strand
Start bp1237927 
End bp1239075 
Gene Length1149 bp 
Protein Length382 aa 
Translation table11 
GC content35% 
IMG OID 
Productcarboxynorspermidine decarboxylase 
Protein accessionYP_393693 
Protein GI78777378 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones20 
Plasmid unclonability p-value0.477804 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAATACTC AAGAGAGCAT TTCTACACCA TACTACATGT GTGATGAGTC ACTTCTTCGT 
GCAAATCTTG AGATATTAGA TTATGTGCAA AAGCAGAGTG GAGCTAAGAT AATTTTAGCT
CTAAAAGGTT TTGCCATGTG GAGTACATTT CCGCTTGTAA AGCAGTACTT AAGAGGTTGT
ACATGTAGTG GACTTCATGA AGCACTTTTG GCTAGAGAAG AGTTTGCAAA AGAGGATAAA
AATCTTGAAG TTCATACCTA CTCGCCAGCT TTTAAAGATG AAGACATTGA TGAGATTGCA
CGCATATCTA ATCACATAGT TTTTAACTCA CCAACTCAAC TCTTTAAATA TTGCGATAGA
GTAAAAAAGA TAAATCCACA TGTTAATCTA TCACTTAGAA TAAATCCAGA ACAGTCATCT
TCTCCAAAAG ACATTTACAA TCCTTGCGGG CTTTACAGCA GGCTTGGAAC AACTTTAGCA
AATTTTGATG AGAGAGTTTT AGAACATATA GATGGACTGA ATTTTCACGC ACTTTGTGAG
CAAGATGTTG ATGCCTTAGA GGATGTTTTA GTAGCTTTTG AAGAGAAATT TTCCAAGTAC
TTTAAAAATA TGAAATATAT AAATTTTGGC GGTGGACACC ACATAACAAA AAAAGGTTAT
GATGTTGATA AGCTTATAAA AATAATAAAA GAGTTTATAA CAAAATATGA CGTTGAAGTC
TATTTGGAAC CTGGGGAAGC AGTTGGTTGG CAAACAGGTG TACTTGTAAG TAGTGTTTTG
GATATTGTTC ACAACGGCAT AGATATAGCC ATTTTAGATA CTTCAGCTGA AGCTCATATG
CCAGATACTT TAGCAATGCC ATATCGAGCT ATGGTTAGAA GAAGCGGCGA GGCTGGAGAG
AAAAAGCACA CATACCGTTT TGGTGGAAAT ACTTGTTTAG CGGGAGACAT CATGGGTGAT
TACTCTTTTG ATAAACCTCT ATATGTAGGC GATAAAGTTA TATTTGAAGA TCAAATTCAT
TACACTTTTG TAAAAAACAC TACATTCAAC GGTATAAAGT TACCCTCATT GGTTATACTA
AGAGAGGATA AAACTCTTGA TGTTATAAAA GAGTTTGGAT ATCAAGATTA TAGAAATAGA
TTATCTTAA
 
Protein sequence
MNTQESISTP YYMCDESLLR ANLEILDYVQ KQSGAKIILA LKGFAMWSTF PLVKQYLRGC 
TCSGLHEALL AREEFAKEDK NLEVHTYSPA FKDEDIDEIA RISNHIVFNS PTQLFKYCDR
VKKINPHVNL SLRINPEQSS SPKDIYNPCG LYSRLGTTLA NFDERVLEHI DGLNFHALCE
QDVDALEDVL VAFEEKFSKY FKNMKYINFG GGHHITKKGY DVDKLIKIIK EFITKYDVEV
YLEPGEAVGW QTGVLVSSVL DIVHNGIDIA ILDTSAEAHM PDTLAMPYRA MVRRSGEAGE
KKHTYRFGGN TCLAGDIMGD YSFDKPLYVG DKVIFEDQIH YTFVKNTTFN GIKLPSLVIL
REDKTLDVIK EFGYQDYRNR LS