| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Suden_1132 |
|---|
| Symbol | |
|---|
| ID | 3763642 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Sulfurimonas denitrificans DSM 1251 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_007575 |
|---|
| Strand | + |
|---|
| Start bp | 1184536 |
|---|
| End bp | 1186365 |
|---|
| Gene Length | 1830 bp |
|---|
| Protein Length | 609 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 35% |
|---|
| IMG OID | |
|---|
| Product | arginine decarboxylase |
|---|
| Protein accession | YP_393645 |
|---|
| Protein GI | 78777330 |
|---|
| COG category | |
|---|
| COG ID | |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 22 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGAATAACT TTGGTCTTGC TATCTGGTCA AATAATAACT TTATAATAGA AGATGGACAA
ATCAGATTAA ACTACAAATG TATGCCTTCA CTTCTTCAGA TTGTTGAGGA GATTCGTTCA
GACGATGTTA GAGGACCAAT ACTTCTTAGG TTTCCACATC TAATCAAGAG TCAAATAAGA
ACGCTCTATA ACTATTTTGA CAAAGCTATA CAACAAAATA ATTATCAAGG CTCTTTTAAT
GCTGTATTTC CACTAAAGGT AAATCAGTTT CCACATGCAA TTGCAGCTAT AACATCTCAA
GGAGCTCAAT TTAACTATGG ACTTGAAGCA GGAAGTAAAG CTGAGTTGAT TCTTGCTATG
AGTAAGACTC CAAGCGGCGC AAATATTACC GTTAATGGTT TTAAAGACAA AGAGATGATA
ACTCTTGGTT TTATAGCAGC TCAAAGCGGA CATAATATTA CTATCACTAT TGAAGGTTTA
GGTGAGCTTG AGACAATCAT AGAAGTAGCA AAGGAGTGTA AATTAAAAGT CCCAAATATT
GGTATAAGAG TAAGGCTTCA CAGCGCAGGA AGCGGCATCT GGGCTAAAAG CGGTGGAATG
GATGCAAAAT TTGGACTAAC TTCCACAGAA ATTATTGAAG CAATTACGCT ACTTAGAGAA
GCAGATCTCT TAGACTATTT GAGCATGATT CACTTTCATA TAGGCTCTCA AATGTCTGAT
ATTGCTCCGC TTAAAAAAGC TCTTCGTGAA GCTGGAAACA TCTATGCTGA GCTGAAAAAA
ATGGGTGCAA CAAAACTAAA CAGCATAAAT ATCGGTGGAG GGCTTGCAGT TGAGTACGAC
CAACACACAC ACTCAAACTC TCGCAACTAC TCAATAGACG AGTTCTCAAG CAGTGTTGTC
TTCTTGCTTG GAGAAATTAT GAATGCAAAA AATGTTTCTC ATCCAGATAT TTTTACAGAA
TCGGGCAGAT TTATTGTCGC TTCTCATGCA GTTTTAATTA CACCTGTTTT AGAACTTTTT
ACACAAGATT TTCAAGAAAA ACTCCTCAAT TTTAAAGCTG TAAATCCACC TCTAATAGAG
GAGTTAATAG AGCTAAACAA ACTCTTAAAC AACACAAACT GTATAGAGTA CCTTCACGAT
GCTCTAGACC ATTTAGAGTC TATTCTTACA CTTTTTGATT TAGGTTACAT TGATCTTCAA
GACCGCTCAA ATGCAGAAAT TTTAGTTCAC AATATTATCA AAAGAGCACT CTATTTAAAA
TCATCTAATC CAACAGATGA GTTAGCGCAA CTTCAAGTAA AGCTTCAAGA GCGCTACCTT
ATAAATGCTT CAATATTTCA AAGTTTGCCA GATTACTGGG GTTTAAATCA GCACTTTCCA
GTTATGCCAC TGCATCATCT AAATACAACA CCTCTTAGAG CAGCATCACT TTGGGATATT
ACATGTGATA GTGATGGTGA AATTGGTTTT AATCCAGATA AACCTCTATA TCTTCATGAT
GTAAATCTTG ATGAAGAGGA TTATTTCTTA GGCTTTTTTA ATGTTGGTGC ATATCAAGAG
ACATTGGGGA TGAATCACAA CCTCTTTACC CATCCAAGTG AATATACAAT TATCATAGGT
GAAAATGATT ATGAGATTAA AAATGCTGTT GAATCAAAGA GTATTTTAGA TATTTTAGAC
TCTCTTGGCT ACGATGCAGT AGAGTTATCA AAAAAGCTTA AAAATGATTT ATCAAACTCT
AGCTTTATTA CAGAGAAAGA AAAAAGTGAT ACACTTGCAA AATTAGAACT ATTTTTACAA
CAAAACGGTT ATTTAAGAAC CACGAACTAG
|
|---|
| Protein sequence | MNNFGLAIWS NNNFIIEDGQ IRLNYKCMPS LLQIVEEIRS DDVRGPILLR FPHLIKSQIR
TLYNYFDKAI QQNNYQGSFN AVFPLKVNQF PHAIAAITSQ GAQFNYGLEA GSKAELILAM
SKTPSGANIT VNGFKDKEMI TLGFIAAQSG HNITITIEGL GELETIIEVA KECKLKVPNI
GIRVRLHSAG SGIWAKSGGM DAKFGLTSTE IIEAITLLRE ADLLDYLSMI HFHIGSQMSD
IAPLKKALRE AGNIYAELKK MGATKLNSIN IGGGLAVEYD QHTHSNSRNY SIDEFSSSVV
FLLGEIMNAK NVSHPDIFTE SGRFIVASHA VLITPVLELF TQDFQEKLLN FKAVNPPLIE
ELIELNKLLN NTNCIEYLHD ALDHLESILT LFDLGYIDLQ DRSNAEILVH NIIKRALYLK
SSNPTDELAQ LQVKLQERYL INASIFQSLP DYWGLNQHFP VMPLHHLNTT PLRAASLWDI
TCDSDGEIGF NPDKPLYLHD VNLDEEDYFL GFFNVGAYQE TLGMNHNLFT HPSEYTIIIG
ENDYEIKNAV ESKSILDILD SLGYDAVELS KKLKNDLSNS SFITEKEKSD TLAKLELFLQ
QNGYLRTTN
|
|---|
| |