| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Suden_1105 |
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| Symbol | |
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| ID | 3763896 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Sulfurimonas denitrificans DSM 1251 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007575 |
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| Strand | + |
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| Start bp | 1161640 |
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| End bp | 1163511 |
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| Gene Length | 1872 bp |
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| Protein Length | 623 aa |
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| Translation table | 11 |
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| GC content | 35% |
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| IMG OID | |
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| Product | RNA polymerase sigma factor RpoD |
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| Protein accession | YP_393618 |
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| Protein GI | 78777303 |
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| COG category | |
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| COG ID | |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 26 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGACAGCAA AAGAACTCAA CAAGGCTATT GAAACATTTT TCGCCAATCA AAAGCCAAAA
GAGTGTTCCA CTTACGAATC ACTTATAGAA CTTTTTGACA AACAACCAAC AGCTGCACAA
GCTGCAAATA TTTTTAAACT AATACAGAAG CATAAAGCTT GCATATATAC ATCATCAGAA
CATGCGAAAT TGCTTAATGA CAAAGAAGCA GAAGCTAGAA GAAGTGCTCA AAGAAAGATG
ATTGAGAATA ACGAGACAGA CAGCTTTGAC ATATTAAAAG AGCATGAACT GCTTGAGTGG
TCAAGATCTG ATTCGCCTGT TCGTATGTAT CTTCGTGAAA TGGGTCAAAT TCCACTGCTT
ACAAAAGAAG AAGAGATTGA GATAAGTAAG AAAATAGAAG GCGGAGAGAG TATTATCATT
GATGCAATCT GTTCTGTTCC ATACCTAATA GATTTTATAC TTGACTATAG AGAGCCTCTG
ATAAACAGAG AAAGAAGAGT TAAAGAGCTT TTTAAGAGCT TTGAAGATGA AAAAGACGAG
AGTGATGATA GTGAAGATAG CGATGATGAT GTAGAAGATA GTGATGAAGA AAATGTAGTT
GAAAAAACAT TAACTGCTAA AGATAAAAGT AGAGTAGAAA AAGTAACTAT AAGCTTTAAA
GCTTTAGAAA AAGCTAAAAA AGAGTGGATA AAACTTGCTG AAAAATTAGC TGAAAATACT
GATGCTGAAC TCACAGCTGA TCTCGTCATG CATTATCTAA GCGCTACTTA TAAAAAAGGG
GTTTTAAAAG AGAGGCTATT AGATCTAGGA CCTACTTCAA AGCTCATAAA TGAGCTTGTA
AAAGCTATGG AGACCGCACT AAAGAGTGAT GAAGGTTATG ATAAAGAGTT AAAAAGATTA
GAGTATAAAC TACCTCTTTT CAATGCAACA CTTAAAGCAA ATCATAGAAT ACTAGTTGAT
AAGATTTGTG ATTTAACAAA AGAGGATATA GCTACTATGG TGCCTGAAGC CACCATGGTT
AGCACATACA TGGAGATTAA GAAGTTAGTT CAAACAAAAG AGGCTTCAAA AAATAGCTTT
GATATGGATC CAGAAAAGTT AGCAGATATT TTAGAACAGA TTAAACGCGG TAAAAATATC
TCTGAAATCT CCAAAACAAA AATGGCTAAA TCAAACCTTA GACTTGTTGT ATCTATTGCT
AAGCGCTACA CAAATCGAGG ATTACCTTTC CTTGATCTTA TTCAAGAGGG AAATATAGGG
CTTATGAAAG CTGTTGACAA GTTTGAGTAT CAAAAAGGTT ACAAATTCTC AACTTATGCT
ACATGGTGGA TTCGCCAAGC AATCTCTCGC GCAATTGCAG ATCAAGCAAG AACTATTCGT
ATCCCTATTC ACATGATAGA GACTATAAAT CGTATTAACA AGATTATGCG TAAACACCTT
CAAGAACATG GTAAAGAGCC AGATGTTGAA GTAATTGCAC TAGAAGTTGG TCTCTCAGTT
GAAAAAGTTA AAAATGTAAT TAAAATCACA AAAGAGCCTA TAAGTCTTGA AGCACCTATT
GGAAGTGAAG ATGATGGGCG CTTTGGCGAT TTTATTGAAG ATAAAACATC GCTATCTCCT
TCTGATGCTA TCTTAAAAGA TGACTTAAGA GTTCAAATTG AGAGTGTTTT AGAGCAGCTA
AATGAGAGAG AGAAAGCGGT TATCAAGCTT CGCTTTGGAA TTATGGATGA TGAGTCTGAT
AGAACATTAG AAGAGATTGG AAAAGAGCTC AATGTAACTC GTGAGAGAGT TCGTCAAATC
GAGTCAAGTG CAATCAAAAA ATTAAAACAT CCTAAAGTTG GAAGAAAACT TAAAAATTAT
ATAGAAGAGT AG
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| Protein sequence | MTAKELNKAI ETFFANQKPK ECSTYESLIE LFDKQPTAAQ AANIFKLIQK HKACIYTSSE
HAKLLNDKEA EARRSAQRKM IENNETDSFD ILKEHELLEW SRSDSPVRMY LREMGQIPLL
TKEEEIEISK KIEGGESIII DAICSVPYLI DFILDYREPL INRERRVKEL FKSFEDEKDE
SDDSEDSDDD VEDSDEENVV EKTLTAKDKS RVEKVTISFK ALEKAKKEWI KLAEKLAENT
DAELTADLVM HYLSATYKKG VLKERLLDLG PTSKLINELV KAMETALKSD EGYDKELKRL
EYKLPLFNAT LKANHRILVD KICDLTKEDI ATMVPEATMV STYMEIKKLV QTKEASKNSF
DMDPEKLADI LEQIKRGKNI SEISKTKMAK SNLRLVVSIA KRYTNRGLPF LDLIQEGNIG
LMKAVDKFEY QKGYKFSTYA TWWIRQAISR AIADQARTIR IPIHMIETIN RINKIMRKHL
QEHGKEPDVE VIALEVGLSV EKVKNVIKIT KEPISLEAPI GSEDDGRFGD FIEDKTSLSP
SDAILKDDLR VQIESVLEQL NEREKAVIKL RFGIMDDESD RTLEEIGKEL NVTRERVRQI
ESSAIKKLKH PKVGRKLKNY IEE
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