| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Suden_1054 |
|---|
| Symbol | oorB |
|---|
| ID | 3763809 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Sulfurimonas denitrificans DSM 1251 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_007575 |
|---|
| Strand | + |
|---|
| Start bp | 1119143 |
|---|
| End bp | 1120000 |
|---|
| Gene Length | 858 bp |
|---|
| Protein Length | 285 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 34% |
|---|
| IMG OID | |
|---|
| Product | 2-oxoglutarate-acceptor oxidoreductase subunit OorB |
|---|
| Protein accession | YP_393567 |
|---|
| Protein GI | 78777252 |
|---|
| COG category | |
|---|
| COG ID | |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 18 |
|---|
| Plasmid unclonability p-value | 0.143582 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGGCATTTA ATTATGATAA ATATTTAAGA TTAGAAAAAA TGCCGACACT ATGGTGTTGG
GGTTGTGGAG ATGGCGTTAT TTTAAAAGCT TTTGTAAGAG CAATTGATAA ATTAGGTCTC
AATAAAGATG ATGTCTGTGT TGTATCTGGA ATAGGGTGCT CGGGAAGGTT CTCATCATAT
ATAGATTTTA ATACAGTTCA CACTACACAT GGTAGAACAG TCGCATTTGC TACAGGAATT
AAACTTGCAA ATCCCAATAA ACATGTTATC TGTGTTGCTG GAGATGGTGA TGCCTTAGCT
ATTGGCGGAA ACCATACAAT ACATGGTTGT AGAAGAAATA TAGATATTAC TATGATTGTA
ATCAATAACT TTATTTATGG TTTGACAAAT TCACAAACAA GTCCTACAAC TCCGCAAGGT
ATGTGGACTG TATCGCAAAA AGCTGGTAAT ATTGACCCAA CTTTTGACGC TGCAAATTTA
GCTATAGCAG CAGGAGCTTC TTTTGTTGCA AGAGAAACTA TGCTTGATCC TAAAAAACTT
GAAAAAGTAT TTGTAAAAGC GATAGAGCAT AAAGGGTTCT CTTTCCTTGA TATTATGTCA
AACTGTCATA TAAATCTTGG TAGAAAAAAC AAGATGGCTT CTGCTATGGA GAATTTGGAG
TGGATTGATA GTATTACTAT TCCTAAGAAG AAGTATGATG AACTCTCTCC TGAAGAGCAG
TTAAATAAAT TTCCAACAGG TATCTTAAAA GAGGATACAA ACGCAGCTGA ATACTGTGAT
ATGTATGCAG AGATAATTAA AGTACATCAA GGCACTAGAA AAACAATTAC TCAAAATGAT
TTTGAGAAAA AAATATAA
|
|---|
| Protein sequence | MAFNYDKYLR LEKMPTLWCW GCGDGVILKA FVRAIDKLGL NKDDVCVVSG IGCSGRFSSY
IDFNTVHTTH GRTVAFATGI KLANPNKHVI CVAGDGDALA IGGNHTIHGC RRNIDITMIV
INNFIYGLTN SQTSPTTPQG MWTVSQKAGN IDPTFDAANL AIAAGASFVA RETMLDPKKL
EKVFVKAIEH KGFSFLDIMS NCHINLGRKN KMASAMENLE WIDSITIPKK KYDELSPEEQ
LNKFPTGILK EDTNAAEYCD MYAEIIKVHQ GTRKTITQND FEKKI
|
|---|
| |