| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Suden_1047 |
|---|
| Symbol | |
|---|
| ID | 3763931 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Sulfurimonas denitrificans DSM 1251 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_007575 |
|---|
| Strand | + |
|---|
| Start bp | 1110707 |
|---|
| End bp | 1112896 |
|---|
| Gene Length | 2190 bp |
|---|
| Protein Length | 729 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 37% |
|---|
| IMG OID | |
|---|
| Product | isocitrate dehydrogenase (NADP+) |
|---|
| Protein accession | YP_393560 |
|---|
| Protein GI | 78777245 |
|---|
| COG category | |
|---|
| COG ID | |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 11 |
|---|
| Plasmid unclonability p-value | 0.0617391 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGTCAAAAA TTATTTGGTC AAAAATAGAT GAAGCACCAG CTTTAGCAAC GTATTCGTTA
CTACCAATCG TAAATGCTTT TACTAAAGCA GCAGGTGTTG AAGTAGTTAC CAGTGATATT
TCACTAGCTG GTAGAGTTAT CTCTAAGTTT TCTGATAGAT TAAAACCAGA GCAAAGAATT
AATGATGAAT TAGCTGAATT AGGCAATGTT GTTTTACAAC CAGATGGCAA CATTATTAAG
CTTCCAAATA TTTCTGCTTC TGTTGGTCAG CTTATTGAGT GTATTACAGA GCTTCAGGCT
CAAGGGTATG ATGTTCCAAA TTATCCTGAA GATGCAAAAA CTGATGAAGA AAAAGCACTT
AAGGAGATAT ACTCTACTTG TTTAGGTTCA GCAGTTAATC CTGTTCTTCG TGAAGGTAAT
TCAGATAGAC GTGCGGCTGC AGCTGTTAAG AGATTTGCTC AAAAAAATCC TCATAAACTT
AGAGCATTTG AATCTCCATC TAAAGCTTAT GTTGCACACA TGAACGGCGG TGATTTTTTC
TCAAATGAAA AGTCAGTTAT TGTAGAAGGC AACGCTCCTG TTACTATTGA ATTAAACGGT
AAAGTTTTAA AAACATTGAA TGATGTAGTT GATAAAGAGA TTATGGATGC TACATTTATG
TCAGCAAAAG CTCTTCAAGC GTTTTATCAA AAAACTTTAG ATGATGCGAA AAAGAATGGT
GTTTTATGGT CACTACACTT AAAAGCTACA ATGATGAAAG TTTCAGATCC AATTATGTTT
GGTCACGCTG TAAAAGTATT TTTCAAAGAT GTTTTTGCTA AATATGGCGA TGAACTAACT
GCTATTGGTT ACAATGCAAA TATGGGTCTT GGTGACTTAT ACAAAAAATT AGAAAAATCA
AGCAAAAAAG CTGAAATTAT AGCTGCTATA GAAGCGACTT ATGATATTCA ACCTCCAATG
GCTATGGTTG ATTCTGACAA AGGTATCACA AACTTACACG CTTCAAACGA CATCATCATA
GATGCTTCTA TGCCAGTTGT TGTACGTGAT GGCGGTAAAA TGTGGAACCG TGACGGAAAA
GTACAAGAGT GTGTATCTGT AATTCCTGAT GCTTCTTATG CGTTTTTCCA TAAAGCAATG
GTTGATGATT GTGTTGCTAA TGGTCAATAC GATGTTACAA CTATGGGTAA TGTTGCAAAC
GTTGGACTTA TGGCTCAAAA AGCTGAAGAG TATGGCTCTC ACCCAACAAC TTTTGAGATT
GCTGAAAATG GCAGTGTTGA AGTGAAACAA AATGGTAAGG TATTAATGTC TCACAACGTA
GAAGCTGGTG ATATTTGGAG AATGTCTCGT GTTAAAGATA TTCCAATTCA AGACTGGGTT
CGTCTTGCTG TAGAGCGTGC ACGTCTAACT GGTTCTCCTG CTGTTTTCTG GCTAGATAAG
AATCGTGCTC ATGATGCAAA TATGATTAAA AAAGTTAACG AGTACTTAAA AAATCATGAT
ACAACAGGTT TAGAACTTCC AATTATGGAT GTTGCATCTG CTGCTAAATA TACAAATGCT
CGTGTTCGTA AAGGTGAAGA TACTATCTCT GTAACAGGAA ATGTTTTACG TGATCACTTA
ACAGATATGT ACCCAATTTT AGAGCTTGGA ACATCTGCAA AAATGTTATC AATTGTGCCA
CTTTTAGCTG GTGGCGGTGT ATTTGAGACA GGTGCTGGCG GATCTGCTCC TAAACATGTT
GACCAATTCT TAGAAGAGGG GCACTTAAGA TGGGATTCAT TAGGTGAGTT TTTAGCTCTT
GCTGAGTCTT TAAGATTTAT TGCTCAGAAA AACTCTGATG ATAAATTGGC TGCTGTTACA
ACTGCTCTTG ATATCGCTAA CGCTGCGTAT TTAGATAACA ACAAAGCCCC ATCAAGAAAA
GCTGGAGAGC CAGACAATAA AGCTTCTCAC TTCTTCTTGG CTCAATACTG GGCTAAGGCT
CTTAGTGAAG GTAAAAATGC AGAATTAGCG GCAAAATTTG CACCTATTGC CAAGGCTTTA
ACAGAGAATG AGGCAAAAAT TATTGAAGAG TTATTGTCTA TTGAAGGTAA AGCTCAAGAT
ATTGGCGGCT ACTATCACCC AGATGATAAG AAAGCAGAGG CTGCTATGAG ACCTTCTGCA
ACTTTAAATA AGATAGTTGA TAGCATATAA
|
|---|
| Protein sequence | MSKIIWSKID EAPALATYSL LPIVNAFTKA AGVEVVTSDI SLAGRVISKF SDRLKPEQRI
NDELAELGNV VLQPDGNIIK LPNISASVGQ LIECITELQA QGYDVPNYPE DAKTDEEKAL
KEIYSTCLGS AVNPVLREGN SDRRAAAAVK RFAQKNPHKL RAFESPSKAY VAHMNGGDFF
SNEKSVIVEG NAPVTIELNG KVLKTLNDVV DKEIMDATFM SAKALQAFYQ KTLDDAKKNG
VLWSLHLKAT MMKVSDPIMF GHAVKVFFKD VFAKYGDELT AIGYNANMGL GDLYKKLEKS
SKKAEIIAAI EATYDIQPPM AMVDSDKGIT NLHASNDIII DASMPVVVRD GGKMWNRDGK
VQECVSVIPD ASYAFFHKAM VDDCVANGQY DVTTMGNVAN VGLMAQKAEE YGSHPTTFEI
AENGSVEVKQ NGKVLMSHNV EAGDIWRMSR VKDIPIQDWV RLAVERARLT GSPAVFWLDK
NRAHDANMIK KVNEYLKNHD TTGLELPIMD VASAAKYTNA RVRKGEDTIS VTGNVLRDHL
TDMYPILELG TSAKMLSIVP LLAGGGVFET GAGGSAPKHV DQFLEEGHLR WDSLGEFLAL
AESLRFIAQK NSDDKLAAVT TALDIANAAY LDNNKAPSRK AGEPDNKASH FFLAQYWAKA
LSEGKNAELA AKFAPIAKAL TENEAKIIEE LLSIEGKAQD IGGYYHPDDK KAEAAMRPSA
TLNKIVDSI
|
|---|
| |