| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Suden_1043 |
|---|
| Symbol | secA |
|---|
| ID | 3763927 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Sulfurimonas denitrificans DSM 1251 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_007575 |
|---|
| Strand | + |
|---|
| Start bp | 1102751 |
|---|
| End bp | 1105324 |
|---|
| Gene Length | 2574 bp |
|---|
| Protein Length | 857 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 35% |
|---|
| IMG OID | |
|---|
| Product | preprotein translocase subunit SecA |
|---|
| Protein accession | YP_393556 |
|---|
| Protein GI | 78777241 |
|---|
| COG category | |
|---|
| COG ID | |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 18 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGCTACAAG CATTAATGGG TAAGATTTTT GGTACTACAA ATGATAGAGA ACTAAAAAGA
TATAGACAAA TAGTAAATAA AATAAATAAC TTAGAGAGCA AATATAAAGC TCTCAGCGAT
GAAGCATTAA AGAGTGCTTT TAATGAGATA AAAGAGAGTG TTTTATCTGG TGGTAAAAGT
TTAGATAGCG TATTAGTCGA CTCTTTTGCG ATAACTAGAG AAGCTAGCAC AAGAGTGCTT
AACATGAGAC ATTTTGATGT TCAGCTTATC GGTGGAATAG TTCTACATGA GGGCAAAATT
GCTGAGATGA AAACAGGAGA GGGTAAAACA TTAGTTGCTA CTCTTCCAAT AGTTCTTAAT
GCAATTAGTG GCAAAGGCGT TCACCTTGTT ACTGTTAATG ACTATCTTGC CTCAAGAGAT
GGCAATGAGA TGCGACCATT ATATGAATTT TTAGGTTTTA GTGTTGGCGT TATCTTAGAA
AATATGCATG ACCCAGTTGT AAAAAGAGAA GTTTACAACG CAGACATTAC ATACGGAACA
AATAACGAAT TTGGATTTGA TTATCTAAGA GACAATATGA GCTATTCTCG TGAAAATATG
GTTCAAAGAG GTCATAATTT TGTTATTGTT GATGAAGTTG ATAGTATCTT GATTGATGAA
GCTAGAACTC CACTTATTAT CTCAGGACCT ACAAACAGAA CACTAAGAGA CTTTAAAGAC
GCAAATGACA TAGCTCTTAA GCTCCTTAAA GATGAGCACT TTAGCGTTGA TGAGAAAGAT
AAAACAGTTC TATTGACAGA AGAGGGTATA ACAAGGGCAG AGGAGCTTTT CAAAGTTGAA
AATCTTTACA GTCCAGAGAA TGCTTCACTA TCTCATATAT TAGATCAGGC ACTAAAGGCG
AATTACCTTT TTGAAAAAGA TGTTGATTAT GTTGTAAATA ACGGTGAAGT TGTAATTGTA
GATGAGTTTA CGGGGCGCCT AAGCGAAGGT CGTCGCTTCT CAGAGGGACT TCATCAAGCC
CTTGAAGCAA AAGAGAGTGT TGAGATAAAA GAAGAGACTC AAACACTAGC TGATATTACA
TTTCAAAACT ACTTTAGAAT GTATAATAAA TTAGCGGGTA TGACAGGAAC AGCACAAACA
GAAGCTTCAG AATTTGCACA AATCTACTCT TTGGATGTTA TCTCTATCCC TACAAATATT
CCTATTTTAA GAAAAGACTT AAACGACTTA ATCTATAAAA CAGAAAAAGA GAAATTTGAA
GCGGTTATAG CTACAATAAA AAAACTCTCA GCTACTGGTC AGCCAGTGCT TATTGGTACT
GCATCTATTG AAAAATCTGA GATTCTACAT GAAGTATTGA AAAAAGAGAA AATTGCGCAT
ACTGTTTTAA ATGCTAAAAA TCATGCACAA GAGGGTGAGA TTATTAAAAA TGCTGGTGCA
AAAGGTGCTG TAACCATCGC TACAAACATG GCAGGACGTG GTGTTGACAT TAAGGTAAAT
GATGAAGTAA AAGCTCTTGG TGGTCTCTAT ATTGTAGGAA CTGAGCGTCA TGAAAACAGA
AGAATTGATA ATCAACTTCG TGGAAGAAGT GGTCGTCAAG GAGACAATGG AACAACACAG
TTTTACCTCT CGCTAGAAGA TAGTCTTTTG CGTATTTTTG GAAGCGATAA AATTAAGAGC
ATCATGGAGA GACTTGGTGT TGAAGATGGA GAGTATATAG AGTCAAAAAT GGTTACTCGC
GCAGTTGAAA AAGCTCAGAA AAAAGTTGAA AATATGCACT ATGAGGGCAG AAAGCATATT
GTTGAATATG ATGATGTTGC AAATGAGCAG AGAAAAATTG TCTATAAATT TAGAAATCAA
CTCCTTGACC CTGAGTTTAA TATATCTATG AAAATTAACG AAATCAGAGC TGAGTATGTG
GCTCATCTTT TTGCTAATGT CTCCATTTTT AATGGCGGGG TAAAAGAGGA TTTTAATTTA
GAAAAACTCT TTAAACTTAT ACATGAAGAG ATAAATTTAG AACTAAATCC AGCTGATTTT
GCATCTTATG AGTATGAAGA ACTCTTAGAA GTTTTAACAC AAAAGATTAA AAGTAGCTAC
GATGAAAAAA TGAGTGTGCT TAATGATTCA ATTTGTAGTG AGATAGAAAG AGAGCTATAC
TTAAAAGAGT TAGATAGTGC TTGGAGAGAG CATCTCTATG CGATGGATAA TATGAAAACA
GGTATTAGGC TAAGAGCATA TAACCAAAAA GACCCTCTTG TAGAGTATAA AAAAGAGAGT
TTTAACCTCT TTACAGAGCT TGTTGAGGAT ATTAAATTTA ACACTATAAA GACTCTTCAA
ATTATTCAAT TTAGAGTTGA AGACCCAGAG GAAGAGGCTA GAAGAGTTGC TGAAAAGTTA
GATATACAAA GAAAGATGAA TGAAGCTTCA ATTCAATTTA ACCATTATCA AAGTGAGATG
GAAAATGAGA GCAAAAAGAT ATCCAGAAAT GATCTTTGCC CTTGTGGAAG TGGAAAAAAA
TACAAACTTT GCTGCGGTAA AAGTGGTCCA AAAAAAGGTG TATTTGCTTC TTGA
|
|---|
| Protein sequence | MLQALMGKIF GTTNDRELKR YRQIVNKINN LESKYKALSD EALKSAFNEI KESVLSGGKS
LDSVLVDSFA ITREASTRVL NMRHFDVQLI GGIVLHEGKI AEMKTGEGKT LVATLPIVLN
AISGKGVHLV TVNDYLASRD GNEMRPLYEF LGFSVGVILE NMHDPVVKRE VYNADITYGT
NNEFGFDYLR DNMSYSRENM VQRGHNFVIV DEVDSILIDE ARTPLIISGP TNRTLRDFKD
ANDIALKLLK DEHFSVDEKD KTVLLTEEGI TRAEELFKVE NLYSPENASL SHILDQALKA
NYLFEKDVDY VVNNGEVVIV DEFTGRLSEG RRFSEGLHQA LEAKESVEIK EETQTLADIT
FQNYFRMYNK LAGMTGTAQT EASEFAQIYS LDVISIPTNI PILRKDLNDL IYKTEKEKFE
AVIATIKKLS ATGQPVLIGT ASIEKSEILH EVLKKEKIAH TVLNAKNHAQ EGEIIKNAGA
KGAVTIATNM AGRGVDIKVN DEVKALGGLY IVGTERHENR RIDNQLRGRS GRQGDNGTTQ
FYLSLEDSLL RIFGSDKIKS IMERLGVEDG EYIESKMVTR AVEKAQKKVE NMHYEGRKHI
VEYDDVANEQ RKIVYKFRNQ LLDPEFNISM KINEIRAEYV AHLFANVSIF NGGVKEDFNL
EKLFKLIHEE INLELNPADF ASYEYEELLE VLTQKIKSSY DEKMSVLNDS ICSEIERELY
LKELDSAWRE HLYAMDNMKT GIRLRAYNQK DPLVEYKKES FNLFTELVED IKFNTIKTLQ
IIQFRVEDPE EEARRVAEKL DIQRKMNEAS IQFNHYQSEM ENESKKISRN DLCPCGSGKK
YKLCCGKSGP KKGVFAS
|
|---|
| |