| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Suden_1040 |
|---|
| Symbol | |
|---|
| ID | 3763924 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Sulfurimonas denitrificans DSM 1251 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_007575 |
|---|
| Strand | + |
|---|
| Start bp | 1097022 |
|---|
| End bp | 1099568 |
|---|
| Gene Length | 2547 bp |
|---|
| Protein Length | 848 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 40% |
|---|
| IMG OID | |
|---|
| Product | bifunctional aconitate hydratase 2/2-methylisocitrate dehydratase |
|---|
| Protein accession | YP_393553 |
|---|
| Protein GI | 78777238 |
|---|
| COG category | |
|---|
| COG ID | |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 13 |
|---|
| Plasmid unclonability p-value | 0.321621 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGTCATTTA TTGAAGATTA TAAAGCACAT ATAGCAGAAA GAGAAACCCT TGGAGTTCCA
CCACTACCAT TAAATGCTGA GCAAACTGTT GCTTTAGTAG AGATGATAAA AGATAAAGTG
GGCGATATGG CTCAAAATGT AGATCTTCTT ACAAATCGTG TATCACCAGG TGTTGATGAC
GCTGCGTATG TAAAAGCTGC ATTTTTAAAT GATATAGCTT CAGAGAAGAT TAGCATACCT
GCAATATCTC CTGCTCGTGC TGTGGAGATG ATGGGAATGA TGCTTGGCGG ATATAATGTC
AAACCTATGG TTGATGCACT TACTTCCAAA AGCAGTGAAG TAGTAGATGC AGCTAAAGAG
GCACTAAAAC ACACTCTTCT TGTTTACGAT GCTTTTAATG ACGTAGAAGA ACTTTATAAA
GCTGGAAATA CTCATGCGGC TGAAGTTATA AAATCATGGG CAGATGCTGA GTGGTTTACA
TCAAGACCAG CATTAGCAGA AAAAATGACC CTAAGTGTAT TTAAAGTAGC TGGAGAGACA
AATACGGATG ACCTCTCACC AGCTTCTGAA GCGTTTACTC GTTCAGATAT TCCACTACAT
GCAAACTCTA TGCTTGTTGC TAAGATGGAT AATCCTATCG AGACTATTAA AAAGCTAAAA
GAAAAAGGCA ATCCAATCGC TTATGTTGGT GATGTTGTTG GAACTGGAAG CTCAAGAAAA
TCTGGTGTAA ACTCTGTTCA GTGGCACATG GGTGAAGATA TCCCAGGTGT TCCAAACAAG
CGCACTGGCG GTGTTGTTCT TGGAAGCATT ATCGCTCCAA TCTTCTTTGC TACATGTGAA
GATTCAGGCG CATTGCCACT TGAGCTTGAT GTATCTGAAA TGGAAACAGG CGATGTAATT
ACTATCTATC CATACAAGGG TGAAGCTCAC AAAGATGGCA AATGTATTGC AACTTTTAAA
CTAAATCCTA ACACTATTAC TGATGAAGTA CGTGCTGGTG GACGTATTCC GTTGATTATC
GGTCGTGGCT TAACTTCTAA AGCTCGTGGT GTTCTTGGTC TTGGTGCATC TGATAAATTC
TTAACGGCTG AACAGCCAGC TGATAGCGGT AAAGGTTATA CTCTAGCTCA AAAGATGGTT
GGTCGCGCAT GTGGCATGAG CGGTGTTCGC CCAGGAATGT ACGTAGAGCC TGAAACATCT
ACAGTTGGTT CTCAAGATAC AACAGGACCA ATGACAAGAG ATGAGATAGT AGAACTTGCG
GCTCTTGGCT TCTCTGCTGA TTTAGTTATG CAGTCATTTT GTCACACAGC AGCGTATCCT
AAGCCATCAG ACATTGTAAT GCACCACACG TTACCAGATT TTATCTCTAA GCGTTCAGGT
GTTGCTCTTC GTCCAGGTGA TGGAGTTATT CACTCTTGGT TAAACAGAAT GGTTCTTCCT
GATACTGTTG GAACTGGTGC TGATAGCCAT ACACGTTTCC CAATTGGTAT ATCTTTCCCT
GGTGGTTCAG GAATAGTTGC ATTTGCTGGT GTAACAGGCT CTATGCCTTT AACTATGCCA
GAATCTGTTC TTGTTCGCTT TAAAGGTGAA CTACAACCTG GTATAACTCT TCGTGACCTA
GTAAATGCTA TTCCTCATCA AGCGATAAAA GAGGGTCTTT TAACTGTTGA GAAAAAGGGT
AAGAAAAACA TATTTGCTGG TCGTATCATG GAGATAGAAG GTATGCCTGA TATGAAGTGT
GAACAAGCTT TTGAACTCTC AGATGCATCT GCTGAGAGAA GCGCAGCTGC ATGTACAGTT
TTACTAAATG AAGAGCCAGT AATTGAGTAC CTAAAATCAA ATGTAACTCT TTTAGAGTCT
ATGATTGAAG CTGGATATGA GGACAAACGT ACAATTAAGC GTCGTATAGA CAAGATGAAA
GAGTGGCTAG CATCTCCATC ACTTATGAAG CCAGATGCTG ATGCAGAGTA CGCAGCAGTA
ATCGAGATAG ATTTGAACAC TATTACAGAA CCTATTTTAG CTTGTCCAAA TGATCCAGAT
GATGTTGCAA CACTAAGTGA AGTTCTTGCA TCTTCTCGTC CTACTAAAAT TGATGAAGTA
TTTGTTGGTT CATGTATGAC AAATATCGGT CACTATCGTG CTTTAGGCGA AGTTTTAAAA
GGTGAAGGCA AAGTTCCAAC AACTCTTTGG GTTTGTCCTC CAACAAAAAT GGATGAAAAA
CAGCTGACTG AAGATGGTTA TTATGTAACT TTTGGTGAAG CTGGTGCTAG AACTGAGATT
CCAGGATGTT CACTATGTAT GGGAAATCAA GCAAGAGTTG CTGATGATGC GGTTGTATTT
TCAACTTCAA CTCGTAACTT TGATAACCGT TTAGGAAAAG GCGCTCAAGT TTATCTTGGT
TCTGCTGAGT TAGCTGCAGT GTGCTCTATA CTTGGACGTA TTCCAACTAA AGCTGAGTAC
TTAGAAAAAA CTAAAAAAAT CATTGGTAAA GAGAGTGAGA TATACAAATA TCTTAACTTT
AATCTTATTA AAGACTATAA ACTCTAA
|
|---|
| Protein sequence | MSFIEDYKAH IAERETLGVP PLPLNAEQTV ALVEMIKDKV GDMAQNVDLL TNRVSPGVDD
AAYVKAAFLN DIASEKISIP AISPARAVEM MGMMLGGYNV KPMVDALTSK SSEVVDAAKE
ALKHTLLVYD AFNDVEELYK AGNTHAAEVI KSWADAEWFT SRPALAEKMT LSVFKVAGET
NTDDLSPASE AFTRSDIPLH ANSMLVAKMD NPIETIKKLK EKGNPIAYVG DVVGTGSSRK
SGVNSVQWHM GEDIPGVPNK RTGGVVLGSI IAPIFFATCE DSGALPLELD VSEMETGDVI
TIYPYKGEAH KDGKCIATFK LNPNTITDEV RAGGRIPLII GRGLTSKARG VLGLGASDKF
LTAEQPADSG KGYTLAQKMV GRACGMSGVR PGMYVEPETS TVGSQDTTGP MTRDEIVELA
ALGFSADLVM QSFCHTAAYP KPSDIVMHHT LPDFISKRSG VALRPGDGVI HSWLNRMVLP
DTVGTGADSH TRFPIGISFP GGSGIVAFAG VTGSMPLTMP ESVLVRFKGE LQPGITLRDL
VNAIPHQAIK EGLLTVEKKG KKNIFAGRIM EIEGMPDMKC EQAFELSDAS AERSAAACTV
LLNEEPVIEY LKSNVTLLES MIEAGYEDKR TIKRRIDKMK EWLASPSLMK PDADAEYAAV
IEIDLNTITE PILACPNDPD DVATLSEVLA SSRPTKIDEV FVGSCMTNIG HYRALGEVLK
GEGKVPTTLW VCPPTKMDEK QLTEDGYYVT FGEAGARTEI PGCSLCMGNQ ARVADDAVVF
STSTRNFDNR LGKGAQVYLG SAELAAVCSI LGRIPTKAEY LEKTKKIIGK ESEIYKYLNF
NLIKDYKL
|
|---|
| |