| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Suden_1036 |
|---|
| Symbol | |
|---|
| ID | 3763919 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Sulfurimonas denitrificans DSM 1251 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_007575 |
|---|
| Strand | + |
|---|
| Start bp | 1090524 |
|---|
| End bp | 1091807 |
|---|
| Gene Length | 1284 bp |
|---|
| Protein Length | 427 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 29% |
|---|
| IMG OID | |
|---|
| Product | diguanylate cyclase |
|---|
| Protein accession | YP_393549 |
|---|
| Protein GI | 78777234 |
|---|
| COG category | |
|---|
| COG ID | |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 16 |
|---|
| Plasmid unclonability p-value | 0.132028 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGATAGAGA TTAGATATCC TGATGTATTG TTAGACTCAC TAGAAAATGG GCATATGATT
ATTGATGAAC ATTTTGTAGT AAGTTATTGG AATAGATGGC TTGCTATAAA TACACAAATA
AACAAAGAAG ATATTTTAGG CAAAAATTTA CAAGAGTTTT ATCCAGATAT AAATTATAAA
GTCCTTTATA GAAAAATAAA AACTGCATTA ACAATTGGTA CACCTACATT TTATGATACA
AATAGCAGTA AAAAATTTAT ATCTATAAAT CGTAATAAAG TAACCACGTC TTCGCTTAAA
CTCATGCAAC AACAAGTAAC TATCTCTCCT TATATTATCT CAGAGAGCAG AGTAATGATC
TCCATTTATG ATATTAGTGA GCTTTTTGAA GCAAAATTAT TGATAAAAAA AGAGATGAAT
AAAGTCAATA AACTAAACGA AAAATTAGAA GCTGATAGAG ACATAATTGA TAAAAATATT
ATGGTTATGA AAACTTCTGC AAATGGATTT ATAAAAGATG TAAGTAGTTT CTTTTGCGAC
TCTTTTAACA TTAGTAAAGA TGAACTTATA GGTAAAAATG TATCTATTTT TAAATCAGAT
GATATATCTG ATATTGTTTA TAGAAATCTT ATAGAAACTC TCAAAAATAA GAAACCTTGG
AATGGCGAGC TTAAGTACAA AACATCAAAA AATCAAGAGA AGTGGTTGCA GTCAAGAGTA
GTGCCGATTT TAGATCTACA TGGAGAGGTG CATGAACTTA ATGCTGTTTA TCATGATATA
ACAAATGAGA AGCTCCTTGC CGAGCTCTAC ATAACAGACT CTCTTACAAA ACTATACAAT
CGTGCCTATT TTGATGAAAC TATAAATATG ATTGTCAAAC ATCAAAGAAA AGCAGATAGC
GATTTTATTT TAGTACTTGT AGATATAGAC CATTTCAAAC TCATTAATGA CACTTATGGC
CATCAAGTTG GAGATGAAGT GCTTGTAGCA ATAGCAAAAA CACTCAAAGG TTCACTAAGA
GATAACGACC TTATTGCAAG ATGGGGTGGA GAAGAGTTTG TAATAATGTT AAAAAATATA
ACCCTTAATG AAGCGAAAAC GATTATTGAA AAGGTTAGAG TAAATATACA AAACTCAATT
ATTAGAGATA ATATAAAAGT TACAGCATCT TTTGGTTTAA CAAAATATAT TATTAACGAA
GATTCAAAAG AGATATTTAA AAGAGCTGAT GATGCCCTAT ATGAAGCAAA AAAAGATGGT
AGAAATAGAG TGGTTGTAAG GTAA
|
|---|
| Protein sequence | MIEIRYPDVL LDSLENGHMI IDEHFVVSYW NRWLAINTQI NKEDILGKNL QEFYPDINYK
VLYRKIKTAL TIGTPTFYDT NSSKKFISIN RNKVTTSSLK LMQQQVTISP YIISESRVMI
SIYDISELFE AKLLIKKEMN KVNKLNEKLE ADRDIIDKNI MVMKTSANGF IKDVSSFFCD
SFNISKDELI GKNVSIFKSD DISDIVYRNL IETLKNKKPW NGELKYKTSK NQEKWLQSRV
VPILDLHGEV HELNAVYHDI TNEKLLAELY ITDSLTKLYN RAYFDETINM IVKHQRKADS
DFILVLVDID HFKLINDTYG HQVGDEVLVA IAKTLKGSLR DNDLIARWGG EEFVIMLKNI
TLNEAKTIIE KVRVNIQNSI IRDNIKVTAS FGLTKYIINE DSKEIFKRAD DALYEAKKDG
RNRVVVR
|
|---|
| |