| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Suden_1032 |
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| Symbol | truD |
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| ID | 3764012 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Sulfurimonas denitrificans DSM 1251 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007575 |
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| Strand | + |
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| Start bp | 1087552 |
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| End bp | 1088625 |
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| Gene Length | 1074 bp |
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| Protein Length | 357 aa |
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| Translation table | 11 |
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| GC content | 33% |
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| IMG OID | |
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| Product | tRNA pseudouridine synthase D |
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| Protein accession | YP_393545 |
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| Protein GI | 78777230 |
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| COG category | |
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| COG ID | |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 21 |
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| Plasmid unclonability p-value | 0.589732 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGGATAGAT TTTATTCACT CTCTCACTCA AGTATAGATT TTCATTTCAA GCAGACACCA
AGAGATTTTG TTGTAGAAGA GGTGCCTCTT TATGAGTTTT GCGGTGAGGG TGAGCACCTT
ATACTTTTTG TCAGAAAAAA AGGAATTTCA ACTCTTGAGT TAGTCTCTAT GATAGCTAAA
TATCTAGGTA TAAAAAACAA AGAGATAGGT TACGCTGGGC TAAAAGACAA ACATGCTATG
ACAAAACAGT ATATCTCTTT GCATAAAAAA TATGAAGAAA AAATGGATAC ATTTGAGCAT
GAAGATGTAA AAATATTATC TAAAACTTAT CACAACAACA AGATAAGAAT AGGGCATTTA
AATGGAAATA AATTCTATAT AAAACTAAAA AAAGTAAATC CGACTTCAGC TCTAAAAATA
GATGAAGCGC TTAAAAATAT AGCTTCTTTT GGTATGCCTA ACTACTTTGG CTATCAAAGA
TTTGGAACAG ATGGAAACAA CCATATTGAT GGAGAGCTAA TTGCAAAGGG CGAAAAAAAA
GAACGAAACC CAAAAGTTAG ACAACTTCTC ATTAGTGCAT ATCAGAGTCA CCTTTTTAAT
CTCTGGTTGA GTAGAAGATT GGAAATAAAT AGCTTAATTC AAAACTTTGA TGTAAAAGAG
CTAGAACCAC TTCTGAATAT ACCTCAAGAT GAGCTATTAA AGATGAAATC ACAAAAGCAC
CCTTTTAAAC TCATTAGCGG AGATATAATG GAGCATTATC CATATGGAAG ACTCTTTGAA
TTTATTGGTG AAGCACATGA TTTTGATAGG TTTAATGCAA AAGATATCTC TGTTACTGGG
CTTTTATGTG GTAAAAAAGC AAAACACTCA ACTGGCTTAT CAAGAGAGAT AGAGAAAGAT
TTTGATGATG AGATAAACGA GGATGGTGCA AGAAGATACG CTTGGGTTTT TCCAAAAGAT
ATTGATGGAA GATATAAAGA TGAAGAAGCA CAATATGAGC TAAATTTTTA TCTTCCAAAA
GGGTGTTACG CAACGGTTCT TATAGAAGAG ATTGCAAAAC GCAAAATTGT TTAG
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| Protein sequence | MDRFYSLSHS SIDFHFKQTP RDFVVEEVPL YEFCGEGEHL ILFVRKKGIS TLELVSMIAK
YLGIKNKEIG YAGLKDKHAM TKQYISLHKK YEEKMDTFEH EDVKILSKTY HNNKIRIGHL
NGNKFYIKLK KVNPTSALKI DEALKNIASF GMPNYFGYQR FGTDGNNHID GELIAKGEKK
ERNPKVRQLL ISAYQSHLFN LWLSRRLEIN SLIQNFDVKE LEPLLNIPQD ELLKMKSQKH
PFKLISGDIM EHYPYGRLFE FIGEAHDFDR FNAKDISVTG LLCGKKAKHS TGLSREIEKD
FDDEINEDGA RRYAWVFPKD IDGRYKDEEA QYELNFYLPK GCYATVLIEE IAKRKIV
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