Gene Suden_0910 details

Gene Information

• Locus tag: Suden_0910
• Symbol: dnaE
• ID: 3764084
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Sulfurimonas denitrificans DSM 1251
• Kingdom: Bacteria
• Replicon accession: NC_007575
• Strand: +
• Start bp: 943988
• End bp: 947548
• Gene Length: 3561 bp
• Protein Length: 1186 aa
• Translation table: 11
• GC content: 38%
• Product: DNA polymerase III subunit alpha
• Protein accession: YP_393423
• Protein GI: 78777108

Plasmid Coverage information

• Num covering plasmid clones: 12
• Plasmid unclonability p-value: 0.689093
• Plasmid hitchhiking: No
• Plasmid clonability: normal

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

ATGAGTCCTC AACCATTTAC CCATCTCCAT CTTCATACAG AATACTCTCT TCTTGATGGT 
GCAAATAAAC TAACAAATTT GGTAAAGCAG GTAAAAGAGC TTGGTATGAC GAGTGTTGCT 
ATGACAGATC ATGGCAATAT GTTTGGAGCG ATTGATTTTT ATCAGCAGAT GCGAGCCGCT 
GGGATAAAGC CTATTATCGG GATGGAAGGT TACATTCATA ATGGCGGGAG CATGGATGAT 
AAAAGCTCAA AGCAGAGATT TCATATCTGT CTGTTTGCAA AAAACCAAAA AGGTTATGAA 
AATCTCATGT ACCTCTCTTC AAAAGCTTTC ATAGAGGGCT TTTACTACTT CCCACGTATA 
AATAAAAATG AGCTAAGAGC GCATAGTGAG GGGCTTATAT GCACCTCTGC ATGTCTTCAA 
GGCGAGGTAA ATTGGCACCT AAACCTATCA AATGAGAGAA ATGTTAAAAA CGGCGCTCTT 
GGATATGATG GTGCAAAAGC CGTTGCTCTG GAGTACAAAG AGATATTTGG GGATGATTTT 
TATTTAGAGC TTATGCGTCA TGGGATTGGC GATCAGCTCT TTATAGATGA GCAGGTGTTA 
AAACTATCTA AAGAGTTAGA TATAAAAGTA GTAGCTACAA ATGATACACA CTATACATTT 
GCAGAAGATG CACAGTATCA TGAAGCTTTT ATGTGTATAG GAATGAATAA ACTCTACGAC 
GACCCAAACC GTATGCGTCA CTCTGTTCAT GAGTTTTATC TAAAGAGCCC AGCACAGATG 
GCGATGCTTT TTGCAGATAT TCCTGAAGCT ATTGAACATA CACAAGAGAT AGTTGAGAAG 
TGCAACTTAG AGCTAAAATT GGGCGACCCA GTTCCTCCAA ACTTTAAATT TTCTGCAGAG 
TATGCACGAA ATGATGGGTT AGAGATAAAT GGTAGTGATA AGAATGAGAT TGATGCTGAG 
TATTTTGTTT ACCGCTGCAA AATAGGGCTT GAGCATCGTT TAGCACATGT AGCCGAGGAG 
AAACATCAAG AGTATAGAGA TAGATTAGAT TTTGAGATGA ATGTCATAAA CTCTATGAAG 
TTTCCTGGTT ACATGTTAAT CGTTTGGGAT TTTGTCAAAG TTGCCAAAGA GAAGGGCATT 
GCCGTTGGTC CAGGGCGAGG AAGTGCGGCT GGGAGTTTGG TTGCTTATTC GCTTGAGATT 
ACAGATATTG ACCCGATGAA GTATGATTTG CTTTTTGAGA GATTTTTAAA TCCTGAGCGT 
GTAAGTATGC CCGATATCGA TATGGACTTT ATGCAGGCTC GTCGAGGTGA AGTAATAGAT 
TATGTGGTAG AGAAATATGG ACGAAATCAA GTAGCGCAAA TTATCACTTT TGGTTCACTT 
TTGGCAAAAG GAGTAATCCG TGATGTTGCT AGAGTTTTGG ATATGCCACT CTCAGAGGCT 
GACAAAATGG CAAAACTCGT TCCCGATGAG CTTGGAATCA CGCTAAATGG AAGAACAAAA 
AATGGAGAGT TTATAGCTGG AGCTTTTCAA AAAGAGCCAA AATTAAAAGA GTTAATAGAT 
AGTGATGCAA ATGCTGCAAG AGTTTGGGAG TTTGCAAAAA AACTTGAAGG ATTAAAGAGA 
AATTCTGGTA TTCATGCCGC TGGAGTAGTT ATATCAAACG AAGAGTTATG GAAAAAAACG 
CCTATTTATA AGCCCTCAGG CGAGGATGTT TTTGTAACTC AGTACTCTCT AAACTACCTT 
GAAGATGTTG ATTTAATCAA GTTTGACTTC TTGGGTTTAA AAACTCTTGA TGTAATCGAT 
AACGCTATCA AGCTTATAAA GTTTCGTTAC AACAAAGATG TGATTTGGCA CGAGATAGAT 
GAGAATGACC CTAAGGTTTA TGATGTGATT CGCGGTGGAA ATACGGTTGG AATGTTTCAG 
ATAGAGAGCT CTGGTATGCA GGATTTAAAT AAGCAGCTAA AACCAGATAG TTTTGAGGAT 
TTAATTGCGG TTTTAGCACT TTACAGACCT GGACCGATGG AGTCTGGAAT GCTTAAAAGT 
TTTATAGAAA GAAAGCACGG CAGAGAGAAG ATAGAATATA CTTTTGATAG TATGGAGCCT 
ATTCTTAAAA ATACTTACGG AGTCATCGTT TATCAAGAAC AGGTAATGCA GATAGTTCAA 
ACTGTGGGCG GATTTTCTCT TGGTTACTCA GATATTATTC GTCGTTCCAT GGGTAAGAAA 
AAAGATATGT CTGTTTATAA CGACGAATTT GCAAAGGGAG CGCAGAGTCA AGGACTTGAC 
TACGCTGAGG CTTCAAAACT CTTTGATATA ATCGAAAAGT TTGCTGGGTA CGGTTTTAAC 
AAATCTCACT CTGCTGCTTA TGCGATGATT ACATTTCAGA CTGCATGGCT AAAGACATAC 
TATCCAAACG AGTTTATGGC GGCACTTCTT ACATCAGACA AAGATAACAC CGATAAGGTT 
GTGCGCTATA TTGATGAAAC AAAAAGAATG GGTATTGAGC TATCGCCTCC AGACATTTGT 
GACTCACAAC TTGAGTTTTC TGCAATTACA AAAGATAATA GAGAGATAGT TCTCTTTGGT 
TTAGGTGCTA TAAAAGGTGT TGGTGAGGCA GCAGTTTTAT CCATTCTCGA GACAAGAGCA 
GATGGCGGAG AGTTTAAATC ACTAGAAGAT TTTGTAAATA GAATTGAGCC ATCAAAGGTA 
AATAAAAGAG TAGTTGAGTC CATAATTAAA GCTGGTGGTT TTGATAGATT TGGATTCTCA 
AGAAAAGCTC TGCTAGATCA GATAGAAAAG ATAGTTGACA CTGCAAAAGA TGCCTCTATG 
GCTAAAAAAA ATGCAGTTGG AAGTCTTTTT GGAGATGATA GTGAGATAAC AAGCGTTGAG 
CTAAAACTGA GTAATTCGCC AGAGTATGAG CTAAAAGAGA TTTTAGAGTT TGAAAAAGAG 
ACTATCGGTT TTTATATTTC AGGTCATCCG CTAGATGAGT TTAGAGATAA ATTAGATGAG 
TTGGATTATA CGCTCTCCTC AGAACTTGAG AGCGTAAAAG ATGGTACCTA TGCTATTTTT 
ATAGGCAAAA TTGAAGAGAT AGTTAAAAAA ACATCTAAAA AAGGGTCTCA ATTTGGCATA 
GTAAATCTTA TGGATTTTCA TGGAAATATT GAGCTTATGC TGTTTTCAGA CAAAGTTGAT 
GAACTCCAAT CAATGAACTT AAACGAGCCA ATAGCCTTTA AGGTAAAGGT AACTCACACA 
GATATGTTTA CAAGAACAAG TGTGAGCAAA ATTATGACTC TTAAAGAGGC AAAAAAAGAG 
ACACAAAAGA CAAAAAAAGA GGTACGAGAA GCGCCGCTTG AACCGCAAGA GCCGATAAAC 
CTTGCAATAA GATTAGATAC AAACATGAGA GTTTTAGAAG ATTTGTACCA ACTAATTAGA 
CAAAATTCAG GAAACAGAGA ACTAAAAATC ACGATAATAT CAAAACTCCA AAACATAGTT 
ATAGAATCAG CAATAAGAGT TGATTCAAAA ATTATCACTC TCTTAGAGGG CAATGAGAGT 
GTTGATATTT TAGTTTCATA G 

 

Protein sequence

MSPQPFTHLH LHTEYSLLDG ANKLTNLVKQ VKELGMTSVA MTDHGNMFGA IDFYQQMRAA 
GIKPIIGMEG YIHNGGSMDD KSSKQRFHIC LFAKNQKGYE NLMYLSSKAF IEGFYYFPRI 
NKNELRAHSE GLICTSACLQ GEVNWHLNLS NERNVKNGAL GYDGAKAVAL EYKEIFGDDF 
YLELMRHGIG DQLFIDEQVL KLSKELDIKV VATNDTHYTF AEDAQYHEAF MCIGMNKLYD 
DPNRMRHSVH EFYLKSPAQM AMLFADIPEA IEHTQEIVEK CNLELKLGDP VPPNFKFSAE 
YARNDGLEIN GSDKNEIDAE YFVYRCKIGL EHRLAHVAEE KHQEYRDRLD FEMNVINSMK 
FPGYMLIVWD FVKVAKEKGI AVGPGRGSAA GSLVAYSLEI TDIDPMKYDL LFERFLNPER 
VSMPDIDMDF MQARRGEVID YVVEKYGRNQ VAQIITFGSL LAKGVIRDVA RVLDMPLSEA 
DKMAKLVPDE LGITLNGRTK NGEFIAGAFQ KEPKLKELID SDANAARVWE FAKKLEGLKR 
NSGIHAAGVV ISNEELWKKT PIYKPSGEDV FVTQYSLNYL EDVDLIKFDF LGLKTLDVID 
NAIKLIKFRY NKDVIWHEID ENDPKVYDVI RGGNTVGMFQ IESSGMQDLN KQLKPDSFED 
LIAVLALYRP GPMESGMLKS FIERKHGREK IEYTFDSMEP ILKNTYGVIV YQEQVMQIVQ 
TVGGFSLGYS DIIRRSMGKK KDMSVYNDEF AKGAQSQGLD YAEASKLFDI IEKFAGYGFN 
KSHSAAYAMI TFQTAWLKTY YPNEFMAALL TSDKDNTDKV VRYIDETKRM GIELSPPDIC 
DSQLEFSAIT KDNREIVLFG LGAIKGVGEA AVLSILETRA DGGEFKSLED FVNRIEPSKV 
NKRVVESIIK AGGFDRFGFS RKALLDQIEK IVDTAKDASM AKKNAVGSLF GDDSEITSVE 
LKLSNSPEYE LKEILEFEKE TIGFYISGHP LDEFRDKLDE LDYTLSSELE SVKDGTYAIF 
IGKIEEIVKK TSKKGSQFGI VNLMDFHGNI ELMLFSDKVD ELQSMNLNEP IAFKVKVTHT 
DMFTRTSVSK IMTLKEAKKE TQKTKKEVRE APLEPQEPIN LAIRLDTNMR VLEDLYQLIR 
QNSGNRELKI TIISKLQNIV IESAIRVDSK IITLLEGNES VDILVS