Gene Suden_0871 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSuden_0871 
Symbol 
ID3764142 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSulfurimonas denitrificans DSM 1251 
KingdomBacteria 
Replicon accessionNC_007575 
Strand
Start bp898934 
End bp900220 
Gene Length1287 bp 
Protein Length428 aa 
Translation table11 
GC content38% 
IMG OID 
Product3-phosphoshikimate 1-carboxyvinyltransferase 
Protein accessionYP_393384 
Protein GI78777069 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones18 
Plasmid unclonability p-value0.194117 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAGTAGTG TAAAAGTTTA TAAAGCATTA GCATTTTCTT TAAGAACTTC TGAGATAGCT 
TCAGATAAAT CTATATCTCA TCGTTGTGCC ATGTTTGCTA TGTTAGCAGA TGGAACAAGC
CAGATTACAA ATTTTTTAAG AGCTGAAGAT ACGATGAACT CTTTAAAAAT TGTAAAAAAT
CTAGGCGCAA CCATTGATGA TGATGGAGAG ACAATTAAAA TAAGTTCTGA TGGCATAAAA
GAGAGTAGTG AAGTCTTGGA TTGTGGAAAT TCTGGAACAG GTATGAGACT TTTTTGCGGG
CTTTTAAGTT CTGCCGATGG ACATTTTGTG TTGAGTGGAG ATGAGTATCT TCGCCGCCGT
CCTATGAAAA GAATTACCGC CCCACTTAGA GATATAGGCG CAAAACTCGA TGGAAGAGAG
AATGGAGACT TAGCACCGCT AAGCATCAGA GGTGCATCAC TTAAAGCGTT TAATTATGAG
AGTAAAATAG CTTCTGCACA AGTTAAGAGC GCTATGATAC TAGCGGCTCT AAGAGCTGAT
GGGGAGTGTA GTTTCTCTGA ACCAGAACTT AGCCGTGATC ACACAGAGAG AATGTTAAAG
GGGATGGGTG CAGAGATAGA AGTAGAAGGT TTGATTACTA AAATAAAGCC TATGAAAAAA
CTTCTCTCAC CACTTAAGAT TAGAGTTCCT GCAGATCCAT CAAGTGCATT TTTCTTTGCA
GTTGCTGCTG CTATCACTCC TAATTCTAAT GTTGTTTTAG AGGGAGTTAC TTTAAACCCA
ACCAGAATAG AGGCTTTTAA AGCGCTAGAG AGAATGGGTG CAGATATAAG ATATGAGGCG
ACAGAGAACA TATATGAGCC AATAGGGAAT ATACATGTTA AATATGCTCC GTTAAAGGCT
ATAACAGTTG AAGATAATAT ATCATGGCTG ATAGATGAAC TACCAGCTTT ATCTATCGCT
TTTGCATGTG CAGATGGAGT TAGCATTGTA AAAAATGCAC AGGAGCTTAG AGTAAAAGAG
AGTGATAGAA TCTCAACAGT TGTAAATGGG CTTAAAGCTT GTGGCATTGA GGTAGATGAA
GTTCATGATG GATATAGCGT TAAAGGCGGA GTTCTCAAAG AGGCTAAAAT AGATAGTCAC
GGGGATCATA GAATTGCTAT GAGTTTCATC ATAGCAGGAG TTACATGTGG AATGAGGGTT
GATGATATCG CTTGTATAAA CACATCATTT CCAAACTTCT TTGAACTACT TAAGAAAATA
ACAAAAGTAG AATTCACTTC TTTATAG
 
Protein sequence
MSSVKVYKAL AFSLRTSEIA SDKSISHRCA MFAMLADGTS QITNFLRAED TMNSLKIVKN 
LGATIDDDGE TIKISSDGIK ESSEVLDCGN SGTGMRLFCG LLSSADGHFV LSGDEYLRRR
PMKRITAPLR DIGAKLDGRE NGDLAPLSIR GASLKAFNYE SKIASAQVKS AMILAALRAD
GECSFSEPEL SRDHTERMLK GMGAEIEVEG LITKIKPMKK LLSPLKIRVP ADPSSAFFFA
VAAAITPNSN VVLEGVTLNP TRIEAFKALE RMGADIRYEA TENIYEPIGN IHVKYAPLKA
ITVEDNISWL IDELPALSIA FACADGVSIV KNAQELRVKE SDRISTVVNG LKACGIEVDE
VHDGYSVKGG VLKEAKIDSH GDHRIAMSFI IAGVTCGMRV DDIACINTSF PNFFELLKKI
TKVEFTSL