Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Suden_0863 |
Symbol | hemC |
ID | 3764134 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Sulfurimonas denitrificans DSM 1251 |
Kingdom | Bacteria |
Replicon accession | NC_007575 |
Strand | + |
Start bp | 889942 |
End bp | 890883 |
Gene Length | 942 bp |
Protein Length | 313 aa |
Translation table | 11 |
GC content | 37% |
IMG OID | |
Product | porphobilinogen deaminase |
Protein accession | YP_393376 |
Protein GI | 78777061 |
COG category | |
COG ID | |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 13 |
Plasmid unclonability p-value | 0.0113254 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGAAAAAAT TAGTAATAGC AACAAGAGGA TCTCAACTAG CACTTTGGCA GTCAAATCAT ATAAAAGCTA TTTTACAAGA GCAAAATCCA GGTCTTGAAG TTGAGTTAAA TGTTATCGTT ACAACAGGAG ACCGTATTCA AGATAAAGCG CTCTCTAAAA TAGGCGGAAA AGGGCTGTTT TTAAAAGAGC TTGAAGAAGC TATGCTCCAA GGAGAAGCTC AAATTGCAGT TCACTCCCTA AAAGATGTTC CAACAGTTAT GCCTGATGGT CTTATCTTAG CAGCAATCAC AGAGAGAGAA GATTCAAGAG ATGCACTTTT ATCAGAAAAA TATGCAAATA TTGACGCACT GCCTAAAAAT GCAGTGGTAG GTACATCTTC TCTTCGCCGT CGTATGCAGA TACAAAAACT TCGTCCAGAT TTAATCATAA AAGATTTAAG AGGCAATGTT GATACAAGAA TTAGAAAGCT AAAAGAGGGT GAATTTGATG CAATTATTTT AGCTGCTGCT GGAATAAATA GACTCTCTTT GCTTGATGCT GTAAAACATG TATATCCTAT TTCACTTGAA GAGATGGTTC CATCTATGGG ACAAGGGGCA CTTGGAATAG AAGCGGTAAA TGATGCTGAA GTTTTAAGAA TAGTTGCAGG ACTTGAAGAT GAGTATAGTA GAATTGAGAC AACTATAGAG AGATCTTTTG TTGATGAGTT GGAGGGTGGT TGCCAAGTTC CAATAGGTGT TAATGCATCT GTTTTAGATG ATGGAACTAT TAGTATTAGA GCCGTGCTTG GTCTTCCTAA TGGAGAAGAG ATGCTAAGTG ATTCAAAGAT AACATCTAAG AAAGATTATG AAAACATTGG CAGAGAAATA GCAGCAGAGT TTATAGAAAA AGGGGCTAAA GAGCTTCTTA GCCGTGCTGA AGCAATGATG GAAAATAAGT AA
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Protein sequence | MKKLVIATRG SQLALWQSNH IKAILQEQNP GLEVELNVIV TTGDRIQDKA LSKIGGKGLF LKELEEAMLQ GEAQIAVHSL KDVPTVMPDG LILAAITERE DSRDALLSEK YANIDALPKN AVVGTSSLRR RMQIQKLRPD LIIKDLRGNV DTRIRKLKEG EFDAIILAAA GINRLSLLDA VKHVYPISLE EMVPSMGQGA LGIEAVNDAE VLRIVAGLED EYSRIETTIE RSFVDELEGG CQVPIGVNAS VLDDGTISIR AVLGLPNGEE MLSDSKITSK KDYENIGREI AAEFIEKGAK ELLSRAEAMM ENK
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