| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Suden_0579 |
|---|
| Symbol | |
|---|
| ID | 3764385 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Sulfurimonas denitrificans DSM 1251 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_007575 |
|---|
| Strand | + |
|---|
| Start bp | 586888 |
|---|
| End bp | 587898 |
|---|
| Gene Length | 1011 bp |
|---|
| Protein Length | 336 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 33% |
|---|
| IMG OID | |
|---|
| Product | ADP-L-glycero-D-manno-heptose-6-epimerase |
|---|
| Protein accession | YP_393093 |
|---|
| Protein GI | 78776778 |
|---|
| COG category | |
|---|
| COG ID | |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 10 |
|---|
| Plasmid unclonability p-value | 0.00117631 |
|---|
| Plasmid hitchhiking | Yes |
|---|
| Plasmid clonability | hitchhiker |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGAGATACA TTGATGATGA TTTAAAAGAT AAGACTATCC TTATAACAGG GGGTGCTGGT
TTTATTGGTT CAAATTTAGC ATTTTATTTT CAAGAGAACC ATCCAGATGC TAAAGTTGTT
ATTTTAGATA GTTTTAGAAG CAAAGAGACT CTCTCAAATG GTAATCTTAA AAGTTTTGGA
CATTTTAAAA ATTTGATTGG TTTTTTAGGA AAAGTGATAA GCGGTGATAT TAATGATAAA
GAGTTACTTA ATAGTTTAGA GAAAGAGTAT AAGTTTGATT ATATTTTTCA TGAAGCTGCT
ATCTCTGATA CTACGGCACA AGAGCAAGAT TTGATGATAA AAACAAACGT TAATGCTTAT
GAGGACTTGC TTCTTCTTGC CCAAAAACAT GGTGCAAATA TGATTTATGC ATCCTCAGCT
GCAACATATG GCAATGCAGA ATCTCCTCAA AGAGTGGGGT ATGAAGCACC GCAAAATGTT
TATGGTTTTT CTAAACTTTG CATGGATAAT TTAAGCCGTG AGTTTATGAA AAAAAGTACG
ATTTCTATAG TTGGGCTTAG ATATTTTAAT GTTTATGGCG CAAGAGAATA TTTTAAAAAC
TCCACCGCTT CTATGGTTTT ACAGTTTGCT CATCAGATGT TATCTGGCAA AAATCCCACT
CTTTTTGAGA GTAGTGATAA GATTCTTCGC GATTTTATAT ATATAGAAGA TGTTATTTTT
GCAAATATTA AAGCGATGCA GCCAAAGAGA AGTGGTATTT TTAATGTAGG AACGGGCAAA
GCAAGGAGCT TTCAAGATAT AGTAGATATT TTGCAAAGTG AACTTGGAAC TAATCTTACA
TGTGAGTATA TTCCAAATCC ATTTATTGGA AGTTATCAGT TTCACACAGA AGCGGACATC
TCTTCAACAA AAGAGGTTTT GGGTTATGAG AGCAGATTTG AGTTAGAAGA TGGGATTAGA
GCTTACGCAA ATGAAATAAG AAGAATTTAT AATCAAGAAG TTGAAAAATG A
|
|---|
| Protein sequence | MRYIDDDLKD KTILITGGAG FIGSNLAFYF QENHPDAKVV ILDSFRSKET LSNGNLKSFG
HFKNLIGFLG KVISGDINDK ELLNSLEKEY KFDYIFHEAA ISDTTAQEQD LMIKTNVNAY
EDLLLLAQKH GANMIYASSA ATYGNAESPQ RVGYEAPQNV YGFSKLCMDN LSREFMKKST
ISIVGLRYFN VYGAREYFKN STASMVLQFA HQMLSGKNPT LFESSDKILR DFIYIEDVIF
ANIKAMQPKR SGIFNVGTGK ARSFQDIVDI LQSELGTNLT CEYIPNPFIG SYQFHTEADI
SSTKEVLGYE SRFELEDGIR AYANEIRRIY NQEVEK
|
|---|
| |