| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Suden_0571 |
|---|
| Symbol | |
|---|
| ID | 3764523 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Sulfurimonas denitrificans DSM 1251 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_007575 |
|---|
| Strand | + |
|---|
| Start bp | 573606 |
|---|
| End bp | 575420 |
|---|
| Gene Length | 1815 bp |
|---|
| Protein Length | 604 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 37% |
|---|
| IMG OID | |
|---|
| Product | ATP-dependent citrate lyase alpha subunit |
|---|
| Protein accession | YP_393085 |
|---|
| Protein GI | 78776770 |
|---|
| COG category | |
|---|
| COG ID | |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 38 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGGCACAAT TATATACTAG AGATACACAA GCAATTTTTT GGAATAACAA CGCAAGTGCT
ATTCAAAGAA TGCTAGATTA TGACTATACA ATTAAAAGAC AAAAACCTTC GGTTGCAGCT
ATTGTAGCTC CAACAAGTAA CTCTAAATTT GATAAGTTTT TTTATGGTCC AGATGAGATT
ATGATTCCAC TTTATAGAAA TACAACTGAA GCAAAATCAG CACAACCTCA GGCTGATGTG
CTATTAAACT TTGCATCTTT TAGAACAGCT TACGATGTAA CTATGGAAGC ATTAGAGCTT
GGTGGATTTA CATCTATTAT GGTTACAGCC GAGGGAATTC CTGAGAGATT AGCTCGTAAA
ATGAATGCAA CAGGAAGAGA AAAAAATGTC ACTATTATTG GACCAGCAAC AGTTGGTGCA
ATAGCTCCAG GCGCATTTAA AATTGCAAAT ATTGGTGGAA CGATTGAAAA TATTGTTCAA
TCAAAACTTC ACCGTGCAGG ATCTTGTGGA CTTGTAACTC GTTCAGGCGG TCTCTTCAAT
GAGCTCTCAA ATATTATCGC AATTAACGCT GATGGTATCG CTGAGGGTGT TGCAATCGGT
GGCGATAGAT TTGTTGGATC GGTATTTATA GATAATCTTC TTAGAATGGA AGCTAACCCT
GAAGTAAAGT ACATGTTACT TTTAGGTGAA GTTGGTGGAA CTGAAGAGTA TAAGGTAATT
GAAGCTGTAA AAAGTGGAAA AATTAAAAAA CCAATTATTG CATGGTGTAT AGGTACGATA
GCTAAGTATT ATGACAGTGG CGTTCAGTTT GGTCATGCTG GTGCATCTGC AAATGGCGAT
ATGGAAACGG CTGAAGCTAA AAACAGAGCT ATGAAAGAAG TTGGTATTCA TGTTCCTGCA
TCATTCAATG ATTTACCAGA AATAATTAGT GCGCTTTACC ATGAACTCCA TGCAGAGGGA
ACTATAAAAG ATATTATAGA ACCTTCTATG AATGTATGTC CAAGTGTAAG AAAATCAAAA
CAGTTTATCT GTACTATTTC TGATGACAGA GGAGATGAAG CTCACTACTG TGGTTATCCA
ATTAGCTCAG TTGCGACACC AGATACAGGA TTTACTATTG GTGATGTAAT GAGTATCTTA
TGGTTTAAAA AACGCTATCC AAGATGGGCA GTTGACTTTT TAGAAACAGT TCTAAAAACA
GTTGCAGATC ATGGTCCAGC TGTTTCAGGC GCTCACAATG CTAAAGTTAC AGCTCGTGCA
GGTAAAGATG TTATCAGTTC ACTAATTTCT GGACTACTTA CAATTGGGCC TCGTTTTGGT
GGAGCTATTG ATGATGCTGC TAAGTATTTT AAATATGCAA GTGATAATGG AATGAGTCCA
AATGACTTCT TAAATCATAT GAAAAAAGAG GGCATTCCAA TTCCAGGGAT AGGGCATAGA
ATCAAGTCGC TTAAAAACCC AGATTTACGT GTTGAGGGAT TAAAGAAGTT TGCAAAAGCA
AACTTCCCTT CAACTCCGCT TCTTGATTAT GCTTTAACGG TTGAACAACT TACAACATCT
AAAAAAGAGA ATCTTATTTT AAATGTTGAT GGTACTATTG GTATATTAAT GGTTGACATG
TGGAGATCAC TTGGATATAA AGATGAAGAG ATAGATGTAT TTATAAATGC AGGCGCTCTA
AATGCGTTCT TTATTTTAGG TAGAAGTATC GGTTTTATCG GGCATATCTT GGATGAGAAA
CGTCTAGCAA TGCCAATGTA CAGACATCCA ATGGATGATA TCTTATATGA TGTAAAGTTA
GCAGAAAACT TATAG
|
|---|
| Protein sequence | MAQLYTRDTQ AIFWNNNASA IQRMLDYDYT IKRQKPSVAA IVAPTSNSKF DKFFYGPDEI
MIPLYRNTTE AKSAQPQADV LLNFASFRTA YDVTMEALEL GGFTSIMVTA EGIPERLARK
MNATGREKNV TIIGPATVGA IAPGAFKIAN IGGTIENIVQ SKLHRAGSCG LVTRSGGLFN
ELSNIIAINA DGIAEGVAIG GDRFVGSVFI DNLLRMEANP EVKYMLLLGE VGGTEEYKVI
EAVKSGKIKK PIIAWCIGTI AKYYDSGVQF GHAGASANGD METAEAKNRA MKEVGIHVPA
SFNDLPEIIS ALYHELHAEG TIKDIIEPSM NVCPSVRKSK QFICTISDDR GDEAHYCGYP
ISSVATPDTG FTIGDVMSIL WFKKRYPRWA VDFLETVLKT VADHGPAVSG AHNAKVTARA
GKDVISSLIS GLLTIGPRFG GAIDDAAKYF KYASDNGMSP NDFLNHMKKE GIPIPGIGHR
IKSLKNPDLR VEGLKKFAKA NFPSTPLLDY ALTVEQLTTS KKENLILNVD GTIGILMVDM
WRSLGYKDEE IDVFINAGAL NAFFILGRSI GFIGHILDEK RLAMPMYRHP MDDILYDVKL
AENL
|
|---|
| |