Gene Suden_0528 details

Gene Information

• Locus tag: Suden_0528
• ID: 3764444
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Sulfurimonas denitrificans DSM 1251
• Kingdom: Bacteria
• Replicon accession: NC_007575
• Strand: -
• Start bp: 527560
• End bp: 529683
• Gene Length: 2124 bp
• Protein Length: 707 aa
• Translation table: 11
• GC content: 33%
• Product: diguanylate cyclase/phosphodiesterase
• Protein accession: YP_393043
• Protein GI: 78776728

Plasmid Coverage information

• Num covering plasmid clones: 44
• Plasmid unclonability p-value: 1
• Plasmid hitchhiking: No
• Plasmid clonability: normal

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

TTGATAAATA ATCACAATGA TGATTCGTTT GCGTTTTATG GTATTAACAG CGATTCTATA 
GTTGATCAGA GTAATATAGA CATAGAAACG ATTAAAAGCC TCATAAGAAA CCTAAATGAA 
GCTCAAGAAA TCGCACAGAT AGGTCATTGG AAGCTTAATA TAAACACAAA TGAACTTTTT 
TGGTCAGATG AAACTTATAG AATATTTGGA CTCAAACCAA AAGAGGTAAA ACCATCTTAT 
GAAAACTTTT TTACATTTGT ACATGAAGAT GACCGCTCCC TTGTAAATGA TGCTTACATT 
AAATCATTGG AAGACAAAAG CCCATACAGT ATCATACATC GCATAATTAC AAAAGATAAA 
AAACTAAAAT ATGTTGAAGA GAGATGCGTT CATAAACTTG ATGAGAGTGG TAATGTAGTA 
AAATCCATTG GAACTGTTCA TGATATAACA GAGAGAGTTG AGCATGAAAA GGAGCTAGAG 
ATTGCGTCAA ATGTTTTTAA ATACTCATCT GATGGCATAG TTATTACAGA TAAAAACAAT 
AACATTGTCT CTGTAAACAA ATCTTTTGAA AAACTAACAG GATACTCTAA AGAAGAGATT 
ATAGGAAAAA ATCCAAAACT TCTAAGCTCT GGCTGGGGAG ATGAAGAGTT TTATAAAAAC 
ATGTGGTCTA GTCTGCTCAG TAATGATTTA TGGCGTGATG AACTTTGGGA TAGAAAAAAA 
GATGGCTCAC TCTACGCTAT AGAGCAGACT ATTATATGCG TAAGAGACAA AAATCAAGAT 
ATTGTAAACT ACATTGGAAT GTCTCGCGAC ATAACTGAGG CTAAAAACAA AGAAGAGAAG 
ATTCATCAGC TTGCATTTTA TGATTTTCTA ACAAAACTTC CAAATGCAAA GCTTTTTCAA 
CAGGAGGTAG AAGCTTACAT CAAATCTACT CACTACAACA ATGAAACTTT TGCTATTTTA 
TTTTTAGATT TAGATAATTT CAAATGGGTA AACGACTCAC TTGGTCATCA GATAGGAGAC 
CTTTTGCTTA TAGAGATAGC TGCAAAGCTA AAAGAGATTA TTTCACAAGA TAGTATAATC 
TCAAGGCTTG GTGGAGATGA ATTTGTAATT CTAGCTCCAT ATGAAAATTT ACTTACTATC 
TCCCAATTGG CAAACACTAT CTTATGCAGT GTAAAAGATC CTATAAAAGT TCAAAATAGA 
GAAGTAAATG TAAGTTGGAG CATTGGGATA AGTCTCTACC CTCAAAATGG CGAAAACTAT 
AATGATTTGC TAAAAAATGC AGATGCAGCA ATGTATGAAT CAAAAAACAG AGGGAAAAAT 
ACATTTAGAT ATTTTAACGA TATGATGAAT CAAGATGCCA TGTATCGTTT GGAGTTAGAT 
ACAAAATTAA GATATGCAAT AACAAACAAC AGCTTTTTTT TAAATTACCA ACCAAAATAC 
TCATTTGAGC ATGGTAAAAC TATAGGTGTT GAAGCTCTAA TTAGATGGAT AGACAAAGAT 
TTGGGATTCA TTGCACCCGA TAAATTTATA CCAATAGCAG AAGAGTCTAG CTATATAAAT 
GAGATAGGAA GTTGGGTTAT GAAACAAGCC CTTAATGATT TAAAAATCAT CAACTCAAAA 
CTCTCATCTC CAATTAGTAT CTCTATCAAT GTCTCTGGAA AACAGTTAGA GCATGAATCT 
TTTTATGATG AAGCAAGAAC ACTTTTAAAA GAGAGTGGTA TTGAGCCATC TTTGGTGGAA 
TTTGAGATAA CAGAAACCTC TATTATGCAA AATATTGATC ATGTCGTGGA TATTTTAAAG 
AAGATAAAAA TGTTAGGCGT AAAAATATCT ATAGATGACT TTGGAACAGG ATACTCTTCA 
ATGTCATACT TAAAAAAACT CCCTATTGAC ACATTAAAGA TAGATAGAGA GTTTATAAAG 
GAGCTAGAGA TTGATGAAGA TTCAAAAAGT ATCGTTAACG CAATTATCGC ACTCGCCAAA 
TCTTTTAAAC TAACTACAGT AGCTGAGGGC GTTGAAAATG AGGAGCAAAA GCTTATACTA 
GATGGACTAA ATTGCGATAT GACACAGGGC TATCTATATA GCAGACCTCT ATCGCTAGAT 
GATTTGTTAG CATTTTTGTC TTAG 

 

Protein sequence

MINNHNDDSF AFYGINSDSI VDQSNIDIET IKSLIRNLNE AQEIAQIGHW KLNINTNELF 
WSDETYRIFG LKPKEVKPSY ENFFTFVHED DRSLVNDAYI KSLEDKSPYS IIHRIITKDK 
KLKYVEERCV HKLDESGNVV KSIGTVHDIT ERVEHEKELE IASNVFKYSS DGIVITDKNN 
NIVSVNKSFE KLTGYSKEEI IGKNPKLLSS GWGDEEFYKN MWSSLLSNDL WRDELWDRKK 
DGSLYAIEQT IICVRDKNQD IVNYIGMSRD ITEAKNKEEK IHQLAFYDFL TKLPNAKLFQ 
QEVEAYIKST HYNNETFAIL FLDLDNFKWV NDSLGHQIGD LLLIEIAAKL KEIISQDSII 
SRLGGDEFVI LAPYENLLTI SQLANTILCS VKDPIKVQNR EVNVSWSIGI SLYPQNGENY 
NDLLKNADAA MYESKNRGKN TFRYFNDMMN QDAMYRLELD TKLRYAITNN SFFLNYQPKY 
SFEHGKTIGV EALIRWIDKD LGFIAPDKFI PIAEESSYIN EIGSWVMKQA LNDLKIINSK 
LSSPISISIN VSGKQLEHES FYDEARTLLK ESGIEPSLVE FEITETSIMQ NIDHVVDILK 
KIKMLGVKIS IDDFGTGYSS MSYLKKLPID TLKIDREFIK ELEIDEDSKS IVNAIIALAK 
SFKLTTVAEG VENEEQKLIL DGLNCDMTQG YLYSRPLSLD DLLAFLS