Gene Suden_0500 details

Gene Information

• Locus tag: Suden_0500
• ID: 3764583
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Sulfurimonas denitrificans DSM 1251
• Kingdom: Bacteria
• Replicon accession: NC_007575
• Strand: +
• Start bp: 501822
• End bp: 505205
• Gene Length: 3384 bp
• Protein Length: 1127 aa
• Translation table: 11
• GC content: 39%
• Product: twin-arginine translocation pathway signal
• Protein accession: YP_393015
• Protein GI: 78776700

Plasmid Coverage information

• Num covering plasmid clones: 23
• Plasmid unclonability p-value: 1
• Plasmid hitchhiking: No
• Plasmid clonability: normal

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

ATGTATTTAG AAAGTAGAAG AACATTTTTA AAAGGCGCTG CATTTACTGT AGCGGGCGCA 
ACAATAGCAA AGGGTGTATT TACAACTGAT GTTCTTGCTG AATCAGTAAG CAACAGTAAG 
TTTACAAATA CTCCAGATAC TCTATCATTT TATCCACCGA TGAGTGAATG GAATGATTTT 
AAAGAGTTAG ATGGTGATGA CTGGAAAAGA GGCGGTATTG ATCGTCATGG TGTAAGAAGT 
GAATCAAACC CAGAGGGTAT CGAAGTAAAT GACTACATGA TAGTGCCAAC GGCATGTTCA 
AACTGTGAAG CTTCTTGTGG TTTGACTGCA TGGATTGATA AAAAGACATT TACTGTTAAA 
AAGTATATGG GAAATCCGCT TCATCCAGCT TCTCGTGGTA GAAATTGTGC AAAAGGGTAT 
GCTACTCAAT CTCAAATGTA CGATCCAGAT CGTATTGCAT TTCCATTAAA GCGTGCTCCA 
GGCTCTGCTC GTGGTGAGGG CAAATGGATT CGTACTACAT GGGATGAAGC CATGAGTACT 
ATCGGTAAAA AGATGAGAGA TACTATTAAA ATCGGTGATG ATGTATCTAA AAAATCTGTA 
ATGTATCATG TTGGACGCCC AAATGAAAAT GGATTTGTGC CTGCTATTTG GCATTCAATG 
GGGCTTGATG CATATAATTC ACATACTAAT ATCTGCTCAT CAAATGGTCG CACAGGAATA 
CTTCATTTTG CAAACGATGA TAGACCTTCT CCAGATTGGG CTAATGCAAA ACTTGTTTTT 
CTTAACTCAT CTCATGCAGC TGATGCAGGT CACTACTATC AACAATCTGC TTCATTTATA 
GCAGATGCAA GAAAAAAAGG TGCTAAGCTT GTTGTTATGG ACCCTCGTAT GTCAAACTCT 
GCTGGTATGG CAGATCTTTG GATTGCGGTA TGGCCAGGAA CAGAACCAGC TATTTATCTA 
TACTTAGTGC AAAGAATCTT AAATGAAAAC AAAGTGGATA AAGATTTTGT TAAAAAATGG 
ATAAACTGGG AAGTATTTTT AGATAATAAA AAATATTTAG AGTTTATGGT TAGCAAAGGG 
TATATCTCTA AGCTTCCTAA TGGTGATCAG TTTGAAGATT TTATTGATGT TTTAAAAGAG 
TTATACTCTC CATACACACT TGATTATGCA GTTAAAGAGA CACATGTTCC TGCTTACAAG 
CTTGAAGCGC TCTATGATAT GTTCTTATGG GCTGGAACTT CTATATCTAC ATACTTCTGG 
AGAGCTTCAG CTGCTGGAAA TCGTGGTGGT TGGACAGCTG GGAGAACTGG ATATTTTGCA 
TTAGCACTCC GTGGTGCTGT TGGACCAGAG GGTGGAACAT TCTTCCATCA CTGGCATGTT 
ATTTCTGTTG CAGGTAAAGG CGGAAGCTCA ACTATTGGAC AAGGAAAGCG TGGGGCAGAT 
GTTCCTAAGG TAGATGTGTA TAATGAACTC ACATACCCAC CAGAGTGGCC AATCTCTTCG 
TATGAGTTGT CATTCTTGCT ACCGCATCTT TTAACAGATA CTGAGTGGCA GAAAAAATGG 
ATAGACAGAG GCTTTAGTGT TCCACAAAAA TTATCTGTAT ATATTCCTCG TATGTATAAT 
CCTGTCTGGA TTAATCCAGA TGGTTTCAGA TGGATAGAAG TTCTAAAAGA TGAATCTAAA 
ATGGAACTTA CAATGAATCT CTCTCCAGTA TGGAGTGAAA CTAATTGGTA TATGGATTAT 
GTCCTTCCAG TTGGGCTCGC AGGTGAGAGA CATGACCAAC ACTCAGAGGC TACTATGCCA 
GCTCGTTGGA CATCTTTCCG TCAACCTGTT ATGAGAGTTG CACTAGAGAA AATGGGATGG 
AAACCTAAAA ATCCAGCTCG TGGCACATTA GAAGCTCATA TTAAAGCAGG TCTTGGAGAA 
GTTTGGGAAG AGAATGAGTT CTGGTTTGAA TTATGTGTAA ATTATATAGA TCCAACTGGT 
GAACTTGGTA TTAAAAAGAT GTGGGAATCA AAGAAAAATC CTGGTAAACC TGTAACTATC 
GCAGAGTGGT ATGATGCAGC ATTTGGAGAT AACCTGCCAA ATCTTAAAGC AGCAGCTACA 
ACAGATGAAA GATATAAAAA TTCTGAATTC CCAGTATATG AGTACATGAG AGATTATGGT 
GCTTGGATGG AAGAGAACCA TATCTACTCT CCACAAGAGA GAGAGATAAA GGATGATGGA 
GAAAATTACA TCTCACATGG TCATAAATAT GATAAAAAAC ATGTTCATAT AGACAAGAGA 
ACAGGCGTAA TGAGTGCTGA ACACGATGGT AAAAAAACAC CAATGGGCAT TGAAATTGGC 
GGTAAAAAAA TGGAAGGTTT TGCGACGTTA GACAAGAAAC TTGACTTCTT CTGTGAATGG 
CTTGCTGATG ATTGGAAATG GCCAGAATAT GCTATTCCTT TCTATCCAAG AAGTGAAGAA 
GAGAAAAAAG AGATGGTTCA TATAGTATCA CATGTAAATC ACTCTTTTAT GACGGAAGAA 
AATTCGTATG CACTAAACAC TGTATTCCGT CTGCCGTATA ACATCCATAC GCGCTCTGCT 
AACTCAAAGC ATCTTATGGA AATTTCTCAA AACCACGACC CTATTTGGAT CTCAACAAAA 
GATGCAACGC GTCAAGGATT TAAACGTGGA GATGCTATAC GTGTTAACAT AGTAGATAGT 
TTAACAGGGT TAGAGTCTGG TTATTTCGTT GCTATGGCAG TTCCAACAGA GGGAGTTCTT 
CCAGGAACGT TGGCTTGTTC ACACCATGGT GGACGCTGGA AACTTGTTAA TTCAGTCGCA 
GTTCCAAATG GTGTAACAGA TGGTAAAGTT GATGCTCAAC CAGTACTAAG AAATATGAAT 
GACCCTAAAT TTATAGCACA CTCTCCTGAG AATGTAGGTA ATGAAGGTGC GCAAATTAAG 
ATTGAAGACT ATAGCGGGAA AGCTGGCATA AATAGCTTTG GCGTACCAAC TGCTGAAATC 
CAAATGGATG GAAAAGTAGG GAAATTAAAG TATGTAGAAG GAATTAAACC GTTTAAAGCT 
GAGAGATTTG CTGAATATAA TAGAGACAGC GGAAATATCT GGTGGGATGG ACTTAGTGGT 
TCATGGCAAA ATGCTGTCGC AGCTGCACAT CCAGACCCTA TCTCTGGTAT GCACTGTTGG 
CATCAAAAAG TTATTTTAGA GAAGGCTCAA GCGGGCGACA AAATAGGTGA TATTCATGTT 
AACTATGACA ATAACTTTAA AGTATATCAA GGTTGGAGAG ATAAGCTAAC ACGTGGATTG 
GATGACAATT CTACACTTCG CCGCCCTGAA CATCTTAAAC GTCCTTGGGT GCCATTATCT 
TCTAAAGCAT ACAAGATTAA ATAA 

 

Protein sequence

MYLESRRTFL KGAAFTVAGA TIAKGVFTTD VLAESVSNSK FTNTPDTLSF YPPMSEWNDF 
KELDGDDWKR GGIDRHGVRS ESNPEGIEVN DYMIVPTACS NCEASCGLTA WIDKKTFTVK 
KYMGNPLHPA SRGRNCAKGY ATQSQMYDPD RIAFPLKRAP GSARGEGKWI RTTWDEAMST 
IGKKMRDTIK IGDDVSKKSV MYHVGRPNEN GFVPAIWHSM GLDAYNSHTN ICSSNGRTGI 
LHFANDDRPS PDWANAKLVF LNSSHAADAG HYYQQSASFI ADARKKGAKL VVMDPRMSNS 
AGMADLWIAV WPGTEPAIYL YLVQRILNEN KVDKDFVKKW INWEVFLDNK KYLEFMVSKG 
YISKLPNGDQ FEDFIDVLKE LYSPYTLDYA VKETHVPAYK LEALYDMFLW AGTSISTYFW 
RASAAGNRGG WTAGRTGYFA LALRGAVGPE GGTFFHHWHV ISVAGKGGSS TIGQGKRGAD 
VPKVDVYNEL TYPPEWPISS YELSFLLPHL LTDTEWQKKW IDRGFSVPQK LSVYIPRMYN 
PVWINPDGFR WIEVLKDESK MELTMNLSPV WSETNWYMDY VLPVGLAGER HDQHSEATMP 
ARWTSFRQPV MRVALEKMGW KPKNPARGTL EAHIKAGLGE VWEENEFWFE LCVNYIDPTG 
ELGIKKMWES KKNPGKPVTI AEWYDAAFGD NLPNLKAAAT TDERYKNSEF PVYEYMRDYG 
AWMEENHIYS PQEREIKDDG ENYISHGHKY DKKHVHIDKR TGVMSAEHDG KKTPMGIEIG 
GKKMEGFATL DKKLDFFCEW LADDWKWPEY AIPFYPRSEE EKKEMVHIVS HVNHSFMTEE 
NSYALNTVFR LPYNIHTRSA NSKHLMEISQ NHDPIWISTK DATRQGFKRG DAIRVNIVDS 
LTGLESGYFV AMAVPTEGVL PGTLACSHHG GRWKLVNSVA VPNGVTDGKV DAQPVLRNMN 
DPKFIAHSPE NVGNEGAQIK IEDYSGKAGI NSFGVPTAEI QMDGKVGKLK YVEGIKPFKA 
ERFAEYNRDS GNIWWDGLSG SWQNAVAAAH PDPISGMHCW HQKVILEKAQ AGDKIGDIHV 
NYDNNFKVYQ GWRDKLTRGL DDNSTLRRPE HLKRPWVPLS SKAYKIK