Gene Suden_0468 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSuden_0468 
Symbol 
ID3764498 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSulfurimonas denitrificans DSM 1251 
KingdomBacteria 
Replicon accessionNC_007575 
Strand
Start bp470650 
End bp471861 
Gene Length1212 bp 
Protein Length403 aa 
Translation table11 
GC content35% 
IMG OID 
Productdiaminopimelate decarboxylase 
Protein accessionYP_392984 
Protein GI78776669 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones29 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGATAAATT TTAAAGAACT AGCAGCCACT TATAAAACAC CTTTGTATGT CTATGATTTA 
GACTATATGA GTGCACAATA TGAAGAGTTA AAAAGCGCTT TTAAGGGTAG AAAATCTATT
ATGGCATTTG CTATAAAATC AAACTCAAAT CTTAGTGTTA TTAAACATTT TGCTACTTTA
GGAAGTGGAG CTGATTGTGT CTCTATTGGT GAGGTATATC GTGCCGTTTT AGCGGGAGTA
CCTAACTACA AAATCATTTT CTCTGGAGTC GGAAAGAGTG ATGATGAGAT TACTCAAGCT
ATTAAGTTAG ATATTTTATA TATTAACGTA GAGAGTGAGG CAGAGCTTGG CCGTGTAGAG
CTTATAGCAA AAGAACTTGG TGCAAAATGT AGAATAAGCA TCAGAGTAAA TCCAAACATA
GACCCACAAA CTCACCCTTA TATATCAACA GGGCTTCACG ATAACAAGTT TGGAGTAGAG
ATAGATACTG CTAAGAGAAT GTACATAAAG GCAAATAACT CTGAGTATTT AGACCCAGTA
GGTATCCACT TTCATATAGG TTCACAGCTT ACAGAACTGA AGCCTATATA TGAGTCGGCA
GAGATTGTAG CTGATTTAGT GCGTTCACTT CAAAATATAA AAATAGAGCT AAAGTTTTTC
GATATAGGCG GAGGTCTCGG AGTAAAATAC AAAGATGAGA CAACGATAAC TCCATATGAT
TATGCACAAG CTATTTTATC AACTCTAAAA GGTTTAGATT TAACAGTTAT TTGTGAACCA
GGAAGATTTT TAACTGCAAA TGGCGGATAT TTTTTAACTA AAGTTCTTTA TGAAAAAAGA
AATGGCGATA AAAGATTTGT TGTAGTTGAT GGCGGTATGA ACGATTTATT GAGACCAAGT
TTATATAAAG CGTACCATAA AATAGAAGCA ATTACTGAGA GTTTGACAAA ACTTAGTGAA
GCAGATGTTG TAGGACCAGT TTGTGAAAGT GGTGATTTTT TTGCAAAAGG GTACTTGCTT
CCAACTCTAG AGCATAACGA TCTCTTGGTA ATTCACAGTG CTGGAGCGTA TGGCTTTGGT
ATGGGAAGTA ACTATAACAC AAGAGGAAGA AGTGCTGAGG TGGCGATAAA AGGCAAAGAG
GTTAAACTTA TTCGCAAACG TGAAGAGTTT GAGGATTTGA TAGCATTAGA AAAAGAGTAT
TTGGACAATT AA
 
Protein sequence
MINFKELAAT YKTPLYVYDL DYMSAQYEEL KSAFKGRKSI MAFAIKSNSN LSVIKHFATL 
GSGADCVSIG EVYRAVLAGV PNYKIIFSGV GKSDDEITQA IKLDILYINV ESEAELGRVE
LIAKELGAKC RISIRVNPNI DPQTHPYIST GLHDNKFGVE IDTAKRMYIK ANNSEYLDPV
GIHFHIGSQL TELKPIYESA EIVADLVRSL QNIKIELKFF DIGGGLGVKY KDETTITPYD
YAQAILSTLK GLDLTVICEP GRFLTANGGY FLTKVLYEKR NGDKRFVVVD GGMNDLLRPS
LYKAYHKIEA ITESLTKLSE ADVVGPVCES GDFFAKGYLL PTLEHNDLLV IHSAGAYGFG
MGSNYNTRGR SAEVAIKGKE VKLIRKREEF EDLIALEKEY LDN