Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Suden_0468 |
Symbol | |
ID | 3764498 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Sulfurimonas denitrificans DSM 1251 |
Kingdom | Bacteria |
Replicon accession | NC_007575 |
Strand | + |
Start bp | 470650 |
End bp | 471861 |
Gene Length | 1212 bp |
Protein Length | 403 aa |
Translation table | 11 |
GC content | 35% |
IMG OID | |
Product | diaminopimelate decarboxylase |
Protein accession | YP_392984 |
Protein GI | 78776669 |
COG category | |
COG ID | |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 29 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGATAAATT TTAAAGAACT AGCAGCCACT TATAAAACAC CTTTGTATGT CTATGATTTA GACTATATGA GTGCACAATA TGAAGAGTTA AAAAGCGCTT TTAAGGGTAG AAAATCTATT ATGGCATTTG CTATAAAATC AAACTCAAAT CTTAGTGTTA TTAAACATTT TGCTACTTTA GGAAGTGGAG CTGATTGTGT CTCTATTGGT GAGGTATATC GTGCCGTTTT AGCGGGAGTA CCTAACTACA AAATCATTTT CTCTGGAGTC GGAAAGAGTG ATGATGAGAT TACTCAAGCT ATTAAGTTAG ATATTTTATA TATTAACGTA GAGAGTGAGG CAGAGCTTGG CCGTGTAGAG CTTATAGCAA AAGAACTTGG TGCAAAATGT AGAATAAGCA TCAGAGTAAA TCCAAACATA GACCCACAAA CTCACCCTTA TATATCAACA GGGCTTCACG ATAACAAGTT TGGAGTAGAG ATAGATACTG CTAAGAGAAT GTACATAAAG GCAAATAACT CTGAGTATTT AGACCCAGTA GGTATCCACT TTCATATAGG TTCACAGCTT ACAGAACTGA AGCCTATATA TGAGTCGGCA GAGATTGTAG CTGATTTAGT GCGTTCACTT CAAAATATAA AAATAGAGCT AAAGTTTTTC GATATAGGCG GAGGTCTCGG AGTAAAATAC AAAGATGAGA CAACGATAAC TCCATATGAT TATGCACAAG CTATTTTATC AACTCTAAAA GGTTTAGATT TAACAGTTAT TTGTGAACCA GGAAGATTTT TAACTGCAAA TGGCGGATAT TTTTTAACTA AAGTTCTTTA TGAAAAAAGA AATGGCGATA AAAGATTTGT TGTAGTTGAT GGCGGTATGA ACGATTTATT GAGACCAAGT TTATATAAAG CGTACCATAA AATAGAAGCA ATTACTGAGA GTTTGACAAA ACTTAGTGAA GCAGATGTTG TAGGACCAGT TTGTGAAAGT GGTGATTTTT TTGCAAAAGG GTACTTGCTT CCAACTCTAG AGCATAACGA TCTCTTGGTA ATTCACAGTG CTGGAGCGTA TGGCTTTGGT ATGGGAAGTA ACTATAACAC AAGAGGAAGA AGTGCTGAGG TGGCGATAAA AGGCAAAGAG GTTAAACTTA TTCGCAAACG TGAAGAGTTT GAGGATTTGA TAGCATTAGA AAAAGAGTAT TTGGACAATT AA
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Protein sequence | MINFKELAAT YKTPLYVYDL DYMSAQYEEL KSAFKGRKSI MAFAIKSNSN LSVIKHFATL GSGADCVSIG EVYRAVLAGV PNYKIIFSGV GKSDDEITQA IKLDILYINV ESEAELGRVE LIAKELGAKC RISIRVNPNI DPQTHPYIST GLHDNKFGVE IDTAKRMYIK ANNSEYLDPV GIHFHIGSQL TELKPIYESA EIVADLVRSL QNIKIELKFF DIGGGLGVKY KDETTITPYD YAQAILSTLK GLDLTVICEP GRFLTANGGY FLTKVLYEKR NGDKRFVVVD GGMNDLLRPS LYKAYHKIEA ITESLTKLSE ADVVGPVCES GDFFAKGYLL PTLEHNDLLV IHSAGAYGFG MGSNYNTRGR SAEVAIKGKE VKLIRKREEF EDLIALEKEY LDN
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