| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Suden_0401 |
|---|
| Symbol | |
|---|
| ID | 3762716 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Sulfurimonas denitrificans DSM 1251 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_007575 |
|---|
| Strand | + |
|---|
| Start bp | 399171 |
|---|
| End bp | 399962 |
|---|
| Gene Length | 792 bp |
|---|
| Protein Length | 263 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 37% |
|---|
| IMG OID | |
|---|
| Product | 2-dehydro-3-deoxyphosphooctonate aldolase |
|---|
| Protein accession | YP_392917 |
|---|
| Protein GI | 78776602 |
|---|
| COG category | |
|---|
| COG ID | |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 32 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGAAATTAC TCGCTGGACC TTGCGTTATT GAGAGTGAAG AAAACATTTT TAAAATTGCA
AAATCATTAG AGACTTATCA AAATGATAAA ACAATCGATT TTTATTTTAA ATCAAGTTTT
GATAAAGCAA ATCGTACATC ATTAGATAGT TTTAGAGGAC TTGGCATTGA TGAGGGGCTT
AGAATACTTC AAAAAGTCAA AGATGATTTT GGCTACAAAG TAGTTACTGA TGTGCATGAA
TCATGTCAAG TTGCTCAGGT TGCAGAGGTT GTAGATATGC TCCAAATCCC TGCATTTTTG
TGTCGCCAAA CAGATTTGCT TGTTGCGTGT GCAAAAACAA ACAGAGAGGT AAATATCAAA
AAAGGGCAGT TTATAAACCC GCCTGATATG CGCTACTCTG TGGCAAAAGT GCTAAAAACT
AGAGGTTGTG ATGAGGTAAG TTATGAAGCT TCTAAAAAAC ATGGAGTCTT TTTGTGTGAG
AGAGGAAGCT CTTTTGGATA TGGAAATATC ATTGTAGATA TGCGCTCACT CGTTATCATG
AGAGAGTTTG CACCGACTAT ATTTGATGCA ACTCACTCCG TTCAAGCCCC GGGTGCGCTT
GGCGGAAAAA CAGGCGGAGA TAGAACAATG GTGCCATATC TCTCAAGTGC AGCCGCAGCA
GTTGGAGTTG ATGGCTTCTT TTTTGAGACA CATTTTGATC CAAGTATAGC ACTAAGTGAT
GGACCAAATA TGATAAAACT AGATGAACTA GAAACAATAA TAAATAAAAT TAAAAAAATA
CAGGAGATAT AA
|
|---|
| Protein sequence | MKLLAGPCVI ESEENIFKIA KSLETYQNDK TIDFYFKSSF DKANRTSLDS FRGLGIDEGL
RILQKVKDDF GYKVVTDVHE SCQVAQVAEV VDMLQIPAFL CRQTDLLVAC AKTNREVNIK
KGQFINPPDM RYSVAKVLKT RGCDEVSYEA SKKHGVFLCE RGSSFGYGNI IVDMRSLVIM
REFAPTIFDA THSVQAPGAL GGKTGGDRTM VPYLSSAAAA VGVDGFFFET HFDPSIALSD
GPNMIKLDEL ETIINKIKKI QEI
|
|---|
| |