Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Suden_0377 |
Symbol | |
ID | 3763020 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Sulfurimonas denitrificans DSM 1251 |
Kingdom | Bacteria |
Replicon accession | NC_007575 |
Strand | - |
Start bp | 378139 |
End bp | 380124 |
Gene Length | 1986 bp |
Protein Length | 661 aa |
Translation table | 11 |
GC content | 35% |
IMG OID | |
Product | TonB-dependent receptor |
Protein accession | YP_392893 |
Protein GI | 78776578 |
COG category | |
COG ID | |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 16 |
Plasmid unclonability p-value | 0.337812 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
| |
Sequence |
Gene sequence | ATGTTAAGTA AAAAAATCAT CCCTTTATCG CTTGTAGCGG TAACTATTTT AGGTGCAAAT GAAGTTGCAT TACCAAGTGT AAATGTCGAA TCAACTACTA TAACTGAAGT AAGCCAAAAT GCTCAAGTCT CAGCAGACTT AGCTCAAGCA CTAAGTTCAA GCGTTCCAAG TATAGATATG AATCGCAGAA GCGGCATTGC AAACGACATT TTTATCCGTG GACAAAAAAG AGATAACATC TCTGTTGAAG TTGATGGAAC AAAAGTTTGT GGTGCATGTC CAAATAGAAT GGACCCACCT GTTTCTCATA TTTTAGCAAA TCAGATAGAT AAGGTTGAAG TAATTGAGGG ACCTTATGAT GTAGAGACTT TTGGCACAAT GAGTGGTGGA TTAAAAATCA CTACAAAAAA ACCTACAAAA GATATGCATG GTGAAGTAAA CTTTGGTTTA GGAAGCTGGG GTTATAAAAA ATTAGGTGTA ACAGGAAGTG GTGGAACTGA TACTATCCGT GCTCTAATTA GTGCATCTTA TGAGACAAGT GATCAATATA AAGATGGCAA TGGAGACACT CTCTCTGAAC AGGTTGACAA AGCCATAACT AATGGTTCCG CTCCTGCTAT GACAAGATTT CAAACACAAT ACAAAGATAT AGAAGCATAT ACAAAAAAAA GCATTATGAG TAAGGTTTTT GTAAAAACCC TTGAAGATCA AGAGCTTCGT CTGAGTTACA CAGGCAACAG AAGTGATGAT GTGTTATATG CAAATTCAAA AATGGACGCA GCATACGATG ACTCAAATAT TTATAGTGTT GAGTACAATA TTGACAATGT AACAAATAAA TATAAAAATA TAAATATCCA GTATTACTAC TCTGATGTAG ATCACCCGAT GGATACAAAA TATAGAGTTT CTGGTGCTAC TTCGTACATG ACAAATCATT TAAAAACTTC AATGCAAGGC GTAAAACTTA AAAATAGTTT TGATTTAGAT GAGTATAAAA TACTCTTTGG TCTTGATGGC AGCAGAAGAA CATGGGAAGG TAGAAGCTAT GGGACAAACG CTACAACTGG AGTTGTTGGC GCTTCTAGTG TTAGTTTAAC ACATACTCAA ACTGACAACA GAGCTCTATT TGCTAAGGTA GAAAAGAGTT TTGGAGATTT AAAAATTGAG AGTGGTGCGA GATTTGACTC GACTACCATA AAACCAGACG ATGTTACAAA GCAAGATAAT GATTACTCAG CTCTTAATGC AAATATTATA GCAACTTACT CTCTTGATGC TCAAAACAGC ATATTTTTGG GTGTTGGTTC ATCAGCTCGT GTTCCTGATG CTAGAGAGTT ATATATTGGT GGCTTAGGAA CTCAAAATCT AAAACAGACT AAAAATAGAG AGATTGATCT TGGATATGAA GCATCTTATG ATAGTTTTAT GTTTAAAGCA AAAACATTTT ACTCTATGTT AGAGGATTAT ATCTACCTAA AACATACATC TCCAACTGCT TATGCTTTTG AAAATATTGA TGCTAAAGTT TATGGTTTAG AGCTAAGTGG CTCTTACTTT ATAACTGACG CTTTAACTAT GGATGCAAGT GCTTCATATA AAAAAGGTAG AAAAACTTCA ACCCCAACTC AAAAAGATAG AGACCTGTCT GATATTGCGC CTCTTAGAGG AAATGTTGCT CTTAACTATG AGTATATGAA TAACTCAAAA GCTACACTTG AGATGCAAGC ATCTGATAGA TGGGATACGA TTGATAGTGA TAATGGTGAG CAAGAGCTTG CTGGATGGAG CATCTATAAT GCAAAAGTAA AACATGCTAT CAACAAATAT ACAGACTTAA GCGTGGGTGT AAATAATATA TTTGACAAAA CTTACAAACA AAGCAACTCT TATGTTGACT TAACTCTTCT TACCTTAGCT GATAATACAA TGTTATTAAA CGAGCCAGGT AGATACTTCT ACACAAACCT TACATTTAAG TTTTAA
|
Protein sequence | MLSKKIIPLS LVAVTILGAN EVALPSVNVE STTITEVSQN AQVSADLAQA LSSSVPSIDM NRRSGIANDI FIRGQKRDNI SVEVDGTKVC GACPNRMDPP VSHILANQID KVEVIEGPYD VETFGTMSGG LKITTKKPTK DMHGEVNFGL GSWGYKKLGV TGSGGTDTIR ALISASYETS DQYKDGNGDT LSEQVDKAIT NGSAPAMTRF QTQYKDIEAY TKKSIMSKVF VKTLEDQELR LSYTGNRSDD VLYANSKMDA AYDDSNIYSV EYNIDNVTNK YKNINIQYYY SDVDHPMDTK YRVSGATSYM TNHLKTSMQG VKLKNSFDLD EYKILFGLDG SRRTWEGRSY GTNATTGVVG ASSVSLTHTQ TDNRALFAKV EKSFGDLKIE SGARFDSTTI KPDDVTKQDN DYSALNANII ATYSLDAQNS IFLGVGSSAR VPDARELYIG GLGTQNLKQT KNREIDLGYE ASYDSFMFKA KTFYSMLEDY IYLKHTSPTA YAFENIDAKV YGLELSGSYF ITDALTMDAS ASYKKGRKTS TPTQKDRDLS DIAPLRGNVA LNYEYMNNSK ATLEMQASDR WDTIDSDNGE QELAGWSIYN AKVKHAINKY TDLSVGVNNI FDKTYKQSNS YVDLTLLTLA DNTMLLNEPG RYFYTNLTFK F
|
| |