Gene Suden_0377 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSuden_0377 
Symbol 
ID3763020 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSulfurimonas denitrificans DSM 1251 
KingdomBacteria 
Replicon accessionNC_007575 
Strand
Start bp378139 
End bp380124 
Gene Length1986 bp 
Protein Length661 aa 
Translation table11 
GC content35% 
IMG OID 
ProductTonB-dependent receptor 
Protein accessionYP_392893 
Protein GI78776578 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones16 
Plasmid unclonability p-value0.337812 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGTTAAGTA AAAAAATCAT CCCTTTATCG CTTGTAGCGG TAACTATTTT AGGTGCAAAT 
GAAGTTGCAT TACCAAGTGT AAATGTCGAA TCAACTACTA TAACTGAAGT AAGCCAAAAT
GCTCAAGTCT CAGCAGACTT AGCTCAAGCA CTAAGTTCAA GCGTTCCAAG TATAGATATG
AATCGCAGAA GCGGCATTGC AAACGACATT TTTATCCGTG GACAAAAAAG AGATAACATC
TCTGTTGAAG TTGATGGAAC AAAAGTTTGT GGTGCATGTC CAAATAGAAT GGACCCACCT
GTTTCTCATA TTTTAGCAAA TCAGATAGAT AAGGTTGAAG TAATTGAGGG ACCTTATGAT
GTAGAGACTT TTGGCACAAT GAGTGGTGGA TTAAAAATCA CTACAAAAAA ACCTACAAAA
GATATGCATG GTGAAGTAAA CTTTGGTTTA GGAAGCTGGG GTTATAAAAA ATTAGGTGTA
ACAGGAAGTG GTGGAACTGA TACTATCCGT GCTCTAATTA GTGCATCTTA TGAGACAAGT
GATCAATATA AAGATGGCAA TGGAGACACT CTCTCTGAAC AGGTTGACAA AGCCATAACT
AATGGTTCCG CTCCTGCTAT GACAAGATTT CAAACACAAT ACAAAGATAT AGAAGCATAT
ACAAAAAAAA GCATTATGAG TAAGGTTTTT GTAAAAACCC TTGAAGATCA AGAGCTTCGT
CTGAGTTACA CAGGCAACAG AAGTGATGAT GTGTTATATG CAAATTCAAA AATGGACGCA
GCATACGATG ACTCAAATAT TTATAGTGTT GAGTACAATA TTGACAATGT AACAAATAAA
TATAAAAATA TAAATATCCA GTATTACTAC TCTGATGTAG ATCACCCGAT GGATACAAAA
TATAGAGTTT CTGGTGCTAC TTCGTACATG ACAAATCATT TAAAAACTTC AATGCAAGGC
GTAAAACTTA AAAATAGTTT TGATTTAGAT GAGTATAAAA TACTCTTTGG TCTTGATGGC
AGCAGAAGAA CATGGGAAGG TAGAAGCTAT GGGACAAACG CTACAACTGG AGTTGTTGGC
GCTTCTAGTG TTAGTTTAAC ACATACTCAA ACTGACAACA GAGCTCTATT TGCTAAGGTA
GAAAAGAGTT TTGGAGATTT AAAAATTGAG AGTGGTGCGA GATTTGACTC GACTACCATA
AAACCAGACG ATGTTACAAA GCAAGATAAT GATTACTCAG CTCTTAATGC AAATATTATA
GCAACTTACT CTCTTGATGC TCAAAACAGC ATATTTTTGG GTGTTGGTTC ATCAGCTCGT
GTTCCTGATG CTAGAGAGTT ATATATTGGT GGCTTAGGAA CTCAAAATCT AAAACAGACT
AAAAATAGAG AGATTGATCT TGGATATGAA GCATCTTATG ATAGTTTTAT GTTTAAAGCA
AAAACATTTT ACTCTATGTT AGAGGATTAT ATCTACCTAA AACATACATC TCCAACTGCT
TATGCTTTTG AAAATATTGA TGCTAAAGTT TATGGTTTAG AGCTAAGTGG CTCTTACTTT
ATAACTGACG CTTTAACTAT GGATGCAAGT GCTTCATATA AAAAAGGTAG AAAAACTTCA
ACCCCAACTC AAAAAGATAG AGACCTGTCT GATATTGCGC CTCTTAGAGG AAATGTTGCT
CTTAACTATG AGTATATGAA TAACTCAAAA GCTACACTTG AGATGCAAGC ATCTGATAGA
TGGGATACGA TTGATAGTGA TAATGGTGAG CAAGAGCTTG CTGGATGGAG CATCTATAAT
GCAAAAGTAA AACATGCTAT CAACAAATAT ACAGACTTAA GCGTGGGTGT AAATAATATA
TTTGACAAAA CTTACAAACA AAGCAACTCT TATGTTGACT TAACTCTTCT TACCTTAGCT
GATAATACAA TGTTATTAAA CGAGCCAGGT AGATACTTCT ACACAAACCT TACATTTAAG
TTTTAA
 
Protein sequence
MLSKKIIPLS LVAVTILGAN EVALPSVNVE STTITEVSQN AQVSADLAQA LSSSVPSIDM 
NRRSGIANDI FIRGQKRDNI SVEVDGTKVC GACPNRMDPP VSHILANQID KVEVIEGPYD
VETFGTMSGG LKITTKKPTK DMHGEVNFGL GSWGYKKLGV TGSGGTDTIR ALISASYETS
DQYKDGNGDT LSEQVDKAIT NGSAPAMTRF QTQYKDIEAY TKKSIMSKVF VKTLEDQELR
LSYTGNRSDD VLYANSKMDA AYDDSNIYSV EYNIDNVTNK YKNINIQYYY SDVDHPMDTK
YRVSGATSYM TNHLKTSMQG VKLKNSFDLD EYKILFGLDG SRRTWEGRSY GTNATTGVVG
ASSVSLTHTQ TDNRALFAKV EKSFGDLKIE SGARFDSTTI KPDDVTKQDN DYSALNANII
ATYSLDAQNS IFLGVGSSAR VPDARELYIG GLGTQNLKQT KNREIDLGYE ASYDSFMFKA
KTFYSMLEDY IYLKHTSPTA YAFENIDAKV YGLELSGSYF ITDALTMDAS ASYKKGRKTS
TPTQKDRDLS DIAPLRGNVA LNYEYMNNSK ATLEMQASDR WDTIDSDNGE QELAGWSIYN
AKVKHAINKY TDLSVGVNNI FDKTYKQSNS YVDLTLLTLA DNTMLLNEPG RYFYTNLTFK
F