Gene Suden_0343 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSuden_0343 
Symbol 
ID3764699 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSulfurimonas denitrificans DSM 1251 
KingdomBacteria 
Replicon accessionNC_007575 
Strand
Start bp340842 
End bp341591 
Gene Length750 bp 
Protein Length249 aa 
Translation table11 
GC content31% 
IMG OID 
ProducttRNA/rRNA methyltransferase (SpoU) 
Protein accessionYP_392859 
Protein GI78776544 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones10 
Plasmid unclonability p-value0.000467154 
Plasmid hitchhikingYes 
Plasmid clonabilityhitchhiker 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
TTGCAAGATT CACAAGAGTA CAAAGATAAA AAAGCGTATT TTGAAAAAAT CATAACTCTT 
TATGGAAGAA ATGTGATTAT AGAAGTTTTA CTAGACAACA CAATAGAGAT ACATAAACTT
CATCTCTCTA ACTCTAATAA AAGCGATGGT GCTATAGAAA CTATCTTATC TTTAGCAAAA
AAAAGAGATA TTCAAGTCAC TTATCATGAT AAAAATGCAC TTAGTCGCAT AAGTAAAAAT
TCAAAACAAG ATCAAGGTGT TGCAATTGAT ATAATCGCTA ATTCTTATAA AAATGCGAAT
GAGATAAAAA ATCTCAAAAA ATTTAAACTT TTAGCACTTG ATGGCATCCA AAATCCTCAA
AATCTAGGAA TGATTATACG CTCTTGTGCT GCTGGATATA TTGATGGTGT GATTCTTCCT
AAAAAAAATA GTGCTAAAAT CTCTCCTCTT GTCATAAAAG CCAGTGCAGG AACACTGTTT
AAACTTCCTA TTTACTACTG CAACACTTTA GATGAAGTTT TAAAAGAACT AAAAGATACA
AAAATATATC TTCTCTCTTC ACATGCAAAA AAGAGCATCT ACGATTTGCG TCAAGAGGAT
AAATCTATAT TTGTTCTTGG AAATGAGAGT GATGGAGTCT CACGTGAGAT TGAAGCACTT
TGTAACGACT CGATAAATAT CCCTATGAAT AGAGATGTAG AATCTTTAAA TGTAGCAGTC
ACTGCCTCTT TAATCGCTTT TATGCGCTAA
 
Protein sequence
MQDSQEYKDK KAYFEKIITL YGRNVIIEVL LDNTIEIHKL HLSNSNKSDG AIETILSLAK 
KRDIQVTYHD KNALSRISKN SKQDQGVAID IIANSYKNAN EIKNLKKFKL LALDGIQNPQ
NLGMIIRSCA AGYIDGVILP KKNSAKISPL VIKASAGTLF KLPIYYCNTL DEVLKELKDT
KIYLLSSHAK KSIYDLRQED KSIFVLGNES DGVSREIEAL CNDSINIPMN RDVESLNVAV
TASLIAFMR